DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and CG7956

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_001036740.2 Gene:CG7956 / 42545 FlyBaseID:FBgn0038890 Length:1142 Species:Drosophila melanogaster


Alignment Length:1255 Identity:292/1255 - (23%)
Similarity:461/1255 - (36%) Gaps:343/1255 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 SPHSVLLEHRNKS-DSILFESHAVALLTQQETDVIRKQYTKVCDAYGCLGALQLNAGESTVLFLV 80
            |..:.|.|..||: .::....:.:...|||..::..||                           
  Fly   137 SKSTKLFEGMNKTWGAVKSAGNTIKNTTQQAANLATKQ--------------------------- 174

  Fly    81 LVTGCVSMGKIGDIEIFRITQTTFVSLQNAAPNEDKISEVRKLLN-SGTFYFAHTNASASASGAS 144
             |...|.:.:...|| .|||:                 |:.|:.: :.:|||             
  Fly   175 -VKSSVGIREPRHIE-RRITE-----------------ELHKIFDETDSFYF------------- 207

  Fly   145 SYRFDITLCAQRRQQTQE-----TDNRFFWNRMMHIHLMR--FGIDCQSWLLQAMCGSVEVRTVY 202
            |:..|||...||.:...|     .|.|||||:    |::|  ..::.::|:|..:.|.::|....
  Fly   208 SFDCDITNNLQRHEAKSEESQSQPDERFFWNK----HMIRDLINLNDKTWILPIIQGFMQVENCV 268

  Fly   203 IGAKQARAAIISRLSCERAGTRFNVRGTNDEGYVANFVETEQVIYVDGDVTSYVQTRGSVPLFWE 267
            ||.:....|::||.|..|||||:..||.:::|..||:|||||::.......|:.|.|||||::|.
  Fly   269 IGNECFTLALVSRRSRHRAGTRYKRRGVDEKGNCANYVETEQILSFRHHQLSFTQVRGSVPIYWS 333

  Fly   268 QPGVQVGSHKVKLSRGFETSAAAFDRHMSMMRQRYGYQTVVNLLGSSLVGSKEGEAMLSNEFQRH 332
            |||.:. ....:|.||...:..||:.|.:...:.||...:|||:..|      |:.....:....
  Fly   334 QPGYKY-RPPPRLDRGVAETQQAFELHFTKELETYGRVCIVNLVEQS------GKEKTIGDAYAD 391

  Fly   333 HGMSAHKD-VPHVVFDYHQECRGGNFSALAKLKERIVACGANYGV--FH--ASNGQVLREQFGVV 392
            |.:..:.| :.:|.||:|..|||..|..::.|   |.|.|...|.  ||  ...|.:..:: .|.
  Fly   392 HVIKLNNDRLIYVTFDFHDYCRGMRFENVSAL---IDAVGPEAGAMGFHWRDQRGMICNQK-SVF 452

  Fly   393 RTNCLDCLDRTNCVQTYLGLDTLGIQLEALKMGGKQQNI-SRFEEIFRQMWINNGNEVSKIYAGT 456
            |.||:|||||||.|||.:|...|..||..|.:......| .:.:..|..:|.|||:.:|:.||||
  Fly   453 RVNCMDCLDRTNVVQTAIGKAVLESQLVKLGLSPPYTPIPEQLKSPFMVLWANNGDIISRQYAGT 517

  Fly   457 GAIQG----------GSKLMDGARSAARTIQNNLLDNSKQEAIDVLLVGSTLSSELADRARILLP 511
            .|::|          ...:.||..||.|....|..|:.:|..|| |:.|..|.:|......:|  
  Fly   518 NALKGDYTRTGERKISGMMKDGMNSANRFFIQNFADSFRQCIID-LMQGQLLRAEDLQEDEVL-- 579

  Fly   512 SNMLHAPTTVLRELCKRYTEYVRPRMARVAVGTYN--VNGG--KHFRSIV--------FKDSLAD 564
                   :|:|:.|    |...||.:.    |.||  |.|.  :...|||        ||||...
  Fly   580 -------STILQIL----TPETRPPLH----GYYNPGVLGPELQLLESIVTTSYYLARFKDSYRQ 629

  Fly   565 WLLDCHALARSKALVDVNNPSENVDHPVDIYAIGFEEIVDLNASNIMAASTDNAKLWAEELQKTI 629
            ..:|         |:..|..|..     .:.|:|.:...|.|..   ..:.:.|||..|:.::.:
  Fly   630 ATID---------LMLGNQVSSE-----SLSALGGQAGPDENDG---TENAEQAKLLVEDCRRLL 677

  Fly   630 SRDNDYVLLTYQQLVGVCLYIYIRPEHAPHIRDVAIDCVKTGLGGATGNKGACAIRFVLHGTSMC 694
                   |.|.|..||....|...|                    ::|:.....:..:|..|..|
  Fly   678 -------LGTAQYPVGAWGLIDADP--------------------SSGDINETEVDTILLLTDDC 715

  Fly   695 FVCAHFAAGQSQVAERNADYAEITRKLAFPMGRTLKSHDWVF-------WCGDFNYRIDMEKDEL 752
            ::.|.:.:...::.  ..:..::|:.....:|  :.....:|       .|...||.:| |::..
  Fly   716 YIVAEYDSHLDKIV--RFEKVQLTQVRLIELG--MHQQTKIFQGSAPAHLCLRLNYSVD-EQEGY 775

  Fly   753 KECVRNGDLSTVLEFDQLRKEQEAGNVFGEFLEGEITFDPTYKYDLFSDDYDTSEKQRAPAWTDR 817
            ....|:.:|........:.|.||           |:....|...::|....|.:........|..
  Fly   776 FHMFRSANLRFFNNMAYVIKTQE-----------EVAESMTSIVEMFRIALDNAGNTEVRYITGG 829

  Fly   818 VLWRRRKALAEGD----------------FAASAWN--PGKLIHYGRSELKQSDHRPVIAII--- 861
            ||.||:..|...|                .::.|.:  .|:....|::..|...|...:|..   
  Fly   830 VLQRRKSKLPTLDVPRGMPRNLSESQLVQLSSKALSNMAGQFSKLGQTFKKPQAHPSSLAATMNP 894

  Fly   862 ------DAEIMEIDQQRRRAVFEQVIRDLGPPDSTIVVHVLESSATG---DEDGPTIYDENVMSA 917
                  |:|| |..|:..:|||     .||..      |...:||:.   ||...::|:..|.|.
  Fly   895 QVMRQRDSEI-ESGQEAEKAVF-----TLGRK------HRNSNSASSTDTDEHDNSLYEPEVDSD 947

  Fly   918 LITELSKMGEVTLVRYVEDTMWVTFRDGESALNASSKKSIQVCGLDLILELKSKDWQHLVDSEIE 982
            :...:.|.      .|.|:....:.     .:...::|.......|.|..|:.||         .
  Fly   948 VEIAMDKS------NYNENAFLPSV-----GIVMGNQKEDSPSSSDEIRHLEQKD---------S 992

  Fly   983 LCTTNTIPLCANPVEHAQLLQAITPELPQRPKQPPTRPPARPPMPMSPKNSPRHLPHVGVISIVP 1047
            :|.|....|..:       :.::|                               .|||:.:.:.
  Fly   993 MCKTTEDVLTIS-------ITSVT-------------------------------DHVGLPTGLL 1019

  Fly  1048 KPAKPPMPPQPQSQPLIPSPLQPQVAPPRPPAMDTTPSSKSQSPTELVSASSSTSSSGKTSPTAP 1112
            :.|       |..:|:.|:||   :......|.|        ...|.|...||||:...:.|   
  Fly  1020 ENA-------PAIRPITPNPL---ICVEAHEAFD--------DREEGVKPVSSTSARDLSLP--- 1063

  Fly  1113 AVLSGPPTPPRQMQSKQAT-PVSTPTRQVGSPKDPIPSDTAYETASNIYEEIQEDVPAPRHPPPA 1176
                |.||.|...:.||.| |:|...:.:|...||....|.....|                   
  Fly  1064 ----GLPTHPEANKLKQLTSPLSKLAKNIGLNLDPRKIATKTGVLS------------------- 1105

  Fly  1177 GPPPVIGAPMGPPPPLPNRR 1196
              |.::.|...||...|:.|
  Fly  1106 --PTILSAENSPPERDPSSR 1123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532 82/300 (27%)
INPP5c_Synj 538..863 CDD:197323 66/370 (18%)
DUF1866 862..1008 CDD:286093 31/148 (21%)
CG7956NP_001036740.2 Syja_N 174..413 CDD:280532 83/308 (27%)
COG5329 <197..586 CDD:227637 135/426 (32%)
hSac2 663..768 CDD:289241 21/135 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447414
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D26060at33392
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.850

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