DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and SH2D1A

DIOPT Version :10

Sequence 1:NP_569729.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_002342.1 Gene:SH2D1A / 4068 HGNCID:10820 Length:128 Species:Homo sapiens


Alignment Length:121 Identity:30/121 - (24%)
Similarity:48/121 - (39%) Gaps:23/121 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 VIRKQYTKVCDAYGCLGALQLNAGESTVLFLVLVTG--CVSMGKIGDIEIFRITQTTFVSLQ-NA 110
            :.|:...|:..|.|..|:..|...||       |.|  |:.:...|.|..:|::||...|.. ..
Human    11 ISRETGEKLLLATGLDGSYLLRDSES-------VPGVYCLCVLYHGYIYTYRVSQTETGSWSAET 68

  Fly   111 APNEDK--ISEVRKLLNS------GTF----YFAHTNASA-SASGASSYRFDITLC 153
            ||...|  ..:::.|:::      |..    |.....:|| |..|.:..|.|..:|
Human    69 APGVHKRYFRKIKNLISAFQKPDQGIVIPLQYPVEKKSSARSTQGTTGIREDPDVC 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_569729.1 COG5329 61..493 CDD:227637 27/109 (25%)
INPP5c_Synj 538..863 CDD:197323
DUF1866 862..1008 CDD:286093
SH2D1ANP_002342.1 SH2_SAP1a 2..104 CDD:198263 23/99 (23%)
Interaction with FYN SH3 domain. /evidence=ECO:0000250|UniProtKB:O88890 67..92 4/24 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 106..128 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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