DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and CG6805

DIOPT Version :10

Sequence 1:NP_569729.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_611178.1 Gene:CG6805 / 36911 FlyBaseID:FBgn0034179 Length:357 Species:Drosophila melanogaster


Alignment Length:316 Identity:99/316 - (31%)
Similarity:167/316 - (52%) Gaps:19/316 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   562 LADWLLDCHALARS--KALVDVNNPSENVDHPV-DIYAIGFEEIVDLNASNIMAASTDNAKLWAE 623
            |..|.:..|.....  .:|:.:|..:...|:.: |||.|||:|:  .....::....|:.  |..
  Fly    14 LLTWNVGTHTPRNQDLSSLLSLNGTTTCPDNQLPDIYVIGFQEV--STTPQVLKIFNDDP--WVL 74

  Fly   624 ELQKTISRDNDYVLLTYQQLVGVCLYIYIRPEHAPHIRDVAIDCVKTGLGGATGNKGACAIRFVL 688
            ::..::| |:.:|.:..:||.|:.:.::.:.:|.||::::..:..:|||||..|||||.:||..|
  Fly    75 KIADSLS-DHQFVKVDSKQLQGILITMFAQHKHIPHMKEIETEATRTGLGGLWGNKGAVSIRLSL 138

  Fly   689 HGTSMCFVCAHFAAGQSQVAERNADYAEI--TRKLAFPMGRTLKSHDWVFWCGDFNYRI--DMEK 749
            :||.:.|||:|.||...::.||..||.:|  ..|......|.:..||:|||.||.|:|:  ||..
  Fly   139 YGTGVAFVCSHLAAHDEKLKERIEDYHQIVDNHKYNAQGYRRIFDHDFVFWFGDLNFRLSGDMSA 203

  Fly   750 DELKECVRNGDLSTVLEFDQLRKEQEAGNVFGEFLEGEITFDPTYKYDLFSDDYDTSEKQRAPAW 814
            .:::..|.|...:.:|:.|||...:|.||.|....|.:..|.||:|:...::||:.   :|.|||
  Fly   204 WDVRTDVENQRYADLLKLDQLNLLREKGNAFSLLEEQQPNFAPTFKFVEGTNDYNL---KRRPAW 265

  Fly   815 TDRVLWRRRKALAEGDFAASAWNPGKLIHYGRSELKQSDHRPVIAIIDAEIMEIDQ 870
            .||:|.|.:..:..| ...||   .:|.:....:...|||:||.|..:.::...:|
  Fly   266 CDRILHRVQSNIYPG-ITLSA---NQLSYQSHMDYTLSDHKPVSATFNYKVEAANQ 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_569729.1 COG5329 61..493 CDD:227637
INPP5c_Synj 538..863 CDD:197323 98/307 (32%)
DUF1866 862..1008 CDD:286093 1/9 (11%)
CG6805NP_611178.1 EEP 12..308 CDD:469791 98/305 (32%)
Blue background indicates that the domain is not in the aligned region.

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