DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and inppl1b

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_001034224.2 Gene:inppl1b / 368433 ZFINID:ZDB-GENE-030616-75 Length:1226 Species:Danio rerio


Alignment Length:806 Identity:189/806 - (23%)
Similarity:291/806 - (36%) Gaps:261/806 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   540 VAVGTYNVNGGKHFRSIVFKDSLADWLLDCHALARSKALVDVNNPSENVDH-PVDIYAIGFEEIV 603
            |.|||:|:.|...      ..||..| :.|..|..:        |.|::.. |.||||:|.::  
Zfish   406 VFVGTWNMGGTPP------PGSLQSW-VTCSGLGLT--------PDESISSLPHDIYAVGTQD-- 453

  Fly   604 DLNASNIMAASTDNAKLWAEELQKTI--SRDNDYVLLTYQQLVGVCLYIYIRPEHAPHIRDVAID 666
                      :....:.|||.::.|:  |.:.||..:..|.|..:.|.::::|||...|..|...
Zfish   454 ----------NPQGEREWAEHIRATLRTSTNIDYKQVAVQSLWNIRLAVFVKPEHEARISQVNTA 508

  Fly   667 CVKTGLGGATGNKGACAIRFVLHGTSMCFVCAHFAAGQSQVAERNADYAEITRKLAFPMG-RTLK 730
            .||||||...|||||..:..:.:||||.||..|..:|..:...||.::.:|.|.|:  :| :.|.
Zfish   509 SVKTGLGNTLGNKGAVGVSLLFNGTSMGFVNCHLTSGSDKALRRNHNFQDILRLLS--LGEKQLS 571

  Fly   731 SHD------WVFWCGDFNYRIDMEKDELKECVRNGDLSTVLEFDQLRKEQEAGNVFGEFLEGEIT 789
            :.|      .:|||||.|||:|::..::.:.|...:...::..|||.:|:.....|..|.|.:|.
Zfish   572 TFDISLRFNHLFWCGDLNYRLDLDALDILKHVSKREFEELMCADQLTRERHKRKAFFNFKEEKIM 636

  Fly   790 FDPTYKYDLFSDD------YDTSEKQ-RAPAWTDRVLWRRRKALAEGDFAASAWNPGKLIHYG-R 846
            |.|||:|:..|.|      |.:|..| ..|:|.|||||   |:..|.....::        || .
Zfish   637 FPPTYRYERGSRDCYLWQKYKSSGVQVNGPSWCDRVLW---KSYPESHVICTS--------YGCT 690

  Fly   847 SELKQSDHRPVIAIIDAEIMEI----DQQRRRAVFEQVIRDLGPPDSTIVVHVLESSATGDEDGP 907
            .::..|:|.||.|..:..::.:    :....||..|                 ||:         
Zfish   691 DDIFTSEHSPVFATFEVGVISLFPRTESCSERASIE-----------------LEA--------- 729

  Fly   908 TIYDENVMSALITELSKMGEVTLVRYVEDTMWVTFRD------GESALNASSKKSIQVCGLDLIL 966
                   :.|::...||.           ..::.|..      ..||.|.|     |.|.:...|
Zfish   730 -------IEAIVKTSSKA-----------KFFIEFHSRCLEEPRRSAENDS-----QYCEVPGFL 771

  Fly   967 EL--KSK----------DWQHLVDSEIELCTTNTIPLCANPVEHAQLLQAITPE----------- 1008
            :|  .||          |.:||.|..:.|    ::..|.....:.:...|:.|.           
Zfish   772 KLGWSSKQLPKLHPVFLDLEHLRDQHLLL----SVKSCDGFESYGECCVALRPTAGKLLDTFETC 832

  Fly  1009 LPQRPKQ------------PPTRPPARPPM------------PMSPKNSPRHLPHVGVISIVPKP 1049
            |..|.::            ||.|...|..:            .|..:.||   |.....||....
Zfish   833 LTHRGEEMGSIRGRFRVYVPPDRRRIRERVYEWLSIEKDEREMMKDQLSP---PSSSAFSIKAPS 894

  Fly  1050 AKPPMPPQPQSQPL---------------IPSPLQPQ---------VAPPRPPA----------- 1079
            |.....|...:.|.               |||.::..         :..||...           
Zfish   895 ASYVASPNSYTNPAYFIFEEMPVFRKAEEIPSTIKESQVVCANNTVIQLPRVTGSHGHGKRSARR 959

  Fly  1080 MDTT------------PSSKSQSPTELVSASSSTSSSGKTSPTAPAVLSGPPTPPRQMQSKQATP 1132
            .|.|            ||.::||  ||    |||:||.:..|       ||..|......:..|.
Zfish   960 SDFTEIEIPGSLAPYKPSCETQS--EL----SSTASSYQLFP-------GPHVPSTSPNQRHTTH 1011

  Fly  1133 VSTPTRQVGSPKDPIPSDT--AYETASNIY------------EEIQEDVPAPRHPPPAGPPPVIG 1183
            .|..:.|:.|.|:.:..|:  :.:..:|.|            |::::|..              |
Zfish  1012 SSNSSLQLQSHKNNMAPDSELSGKKLTNSYMNHSVFSRDMHKEKVRQDYQ--------------G 1062

  Fly  1184 APMGPPPPLPNRRGPPPIPNRSGNAP 1209
            ...|.|.|:  |.||...|..|...|
Zfish  1063 VHQGRPVPI--RNGPKLYPYVSTRVP 1086

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532
INPP5c_Synj 538..863 CDD:197323 105/340 (31%)
DUF1866 862..1008 CDD:286093 26/167 (16%)
inppl1bNP_001034224.2 SH2_SHIP 2..104 CDD:198206
EEP 404..707 CDD:294334 105/340 (31%)
SAM_superfamily 1165..1221 CDD:301707
SAM 1165..1218 CDD:197735
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579686
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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