DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and Inpp5f

DIOPT Version :10

Sequence 1:NP_569729.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_001101024.2 Gene:Inpp5f / 309008 RGDID:1305777 Length:1130 Species:Rattus norvegicus


Alignment Length:1240 Identity:265/1240 - (21%)
Similarity:441/1240 - (35%) Gaps:365/1240 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 GCLGALQLNAGESTVLFLVLVTGCVSMGKI-GDIEIFRITQTTFVSLQN---------------- 109
            |.:|.:||::  ....:|:|:.....:||: ||.|:.::|:...:||..                
  Rat    50 GVIGKIQLHS--DLPWWLILIRQKALVGKLPGDHEVCKVTKIAVLSLSEMEPQELELELCKKHHF 112

  Fly   110 -----------------------------AAPNEDKISE---------------VRKLLNSGTFY 130
                                         :|||:.|:.|               ::..::|.:||
  Rat   113 GINKPEKIVPSPDDSKFLLKTFTNIKSNVSAPNKKKVKESKEKEKLERRLLEELLKMFMDSESFY 177

  Fly   131 FAHTNASASASGASSYRFDITLCAQR--------RQQTQETDNRFFWNRMMHIHLMRFGI-DCQS 186
            ::.|             :|:|...||        |...|:.|:|||||:.|...|...|. |...
  Rat   178 YSLT-------------YDLTNSVQRQSTGEKDGRPLWQKVDDRFFWNKYMIQDLSEIGTPDVDF 229

  Fly   187 WLLQAMCGSVEVRTVYIGAKQA------------------------RAAIISRLSCERAGTRFNV 227
            |::..:.|.|::..:.:..:.:                        ..|:|||.|..|||.|:..
  Rat   230 WIIPIIQGFVQIEELVVNYEPSDDDKSSPETPPQEATCVDDIHPRFLVALISRRSRHRAGMRYKR 294

  Fly   228 RGTNDEGYVANFVETEQVIYVDGDVTSYVQTRGSVPLFWEQPGVQVGSHKVKLSRGFETSAAAFD 292
            ||.:..|.|||:|||||:|:|.....|::|||||||:||.|.|.:. :.:.:|.:..:.:...|.
  Rat   295 RGVDKNGNVANYVETEQLIHVHNHTLSFIQTRGSVPVFWSQVGYRY-NPRPRLDKSEKETVDCFC 358

  Fly   293 RHMSMMRQRYGYQTVVNLLGSSLVGSKEGEAMLSNEFQRHHGMSAHKDVPHVVFDYHQECRGGNF 357
            .|.....:.|..|.:||     ||.....|.::.:.:.:...:..:..:.:|.||:|:.|||..|
  Rat   359 AHFEEQLKIYKKQVIVN-----LVDQAGREKIIGDAYLKQVLLFNNPRLTYVSFDFHEHCRGMKF 418

  Fly   358 SALAKLKERIVACGANYGVFHASNGQVLREQFGVVRTNCLDCLDRTNCVQTYLGLDTLGIQLEAL 422
            ..:..|.:.|.....:..........|:.:|.|:.|.||:|||||||.||..:....:..||:.|
  Rat   419 ENVQTLTDAIHDIILDMKWCWVDQAGVICKQEGIFRVNCMDCLDRTNVVQAAIARVVMEQQLKKL 483

  Fly   423 KMGGKQQNIS-RFEEIFRQMWINNGNEVSKIYAGTGAIQG-----GSK-----LMDGARSAARTI 476
            .:...:|.:. :....::.||.|||:.:|:.||||.|::|     |.:     :.||..||.|..
  Rat   484 GVMPPEQPLPVKCNRTYQIMWANNGDSISRQYAGTAALKGDFTRTGERKLAGVMKDGVNSANRYY 548

  Fly   477 QNNLLDNSKQEAIDVLLVGSTLSSEL-----ADRARILLPSNMLHAPTTVLRELCKRYTEYVRPR 536
            .:...|..:|..|| |:.|..::.:|     .::....|......:...::.:|.:.|.:.:.| 
  Rat   549 LSRFKDAYRQAVID-LMQGIPVTEDLYSIFTKEKEHEALQKETQRSHQELISQLLQSYMQLLLP- 611

  Fly   537 MARVAVGTYNVNGGKHFRSIVFKDSLADW-LLDCHALARSKALVDV------NNPSENV---DHP 591
                  |....:||              | |:||.......|..||      :|.:..|   |..
  Rat   612 ------GDEKFHGG--------------WALIDCDPSLTDAAHRDVDVLLLLSNSAYYVAYYDDE 656

  Fly   592 VD-IYAIGFEEIVDLNASNIMAAST--DNAKLWAEELQKTISRDNDY------------------ 635
            || :.......:.||....|....|  ...|.....|..|......|                  
  Rat   657 VDKVSQYQRRSLEDLEKIEIGPEPTLFGKPKFSCMRLHYTCKEAGGYFHTLRAVPRSPEEDGKDT 721

  Fly   636 ------VLLTYQQLVGVCLYIYI------RPEHAPHIRDVAIDCVKTGLGGATGNKGACAIRFVL 688
                  :|...:|.:|  |::.|      |....|| .|:        :|..:.|:|:.|     
  Rat   722 LQCIAEMLQITKQAMG--LHVPIIERKLERKSSKPH-EDI--------IGIRSQNQGSLA----- 770

  Fly   689 HGTSMCFVCAHFAAGQSQV--AERNADYAEITRKLAFPMGRTLKSHDWVFWCGDF---NYRIDME 748
            .|.|  |:.:.|::...:|  .:.|.:...: |||                 |:|   ..:::..
  Rat   771 QGKS--FLMSKFSSLNQKVKQTKSNVNIGNL-RKL-----------------GNFTKPEVKVNFL 815

  Fly   749 KDELKECVRNGDLSTVLEFDQLRKEQEAGNVFGEFLEGEITFDPTYKYDLFSDDYDTSEKQRAPA 813
            |..||..:...|.|.        :..|...|.|..::||...|       .|.|.|:..      
  Rat   816 KPNLKVNLWKSDSSL--------ETMENPGVMGNKVQGESDGD-------VSSDNDSYH------ 859

  Fly   814 WTDRVLWRRRKALAEGDFAASAWNPGKLIHYGRSELKQSDH-RPVIAIIDAEIMEIDQQRRRAVF 877
             :|.:|...|.            ..||.:.........:|: .|...|| |....:..:.:.|..
  Rat   860 -SDELLTNSRS------------EEGKQLANSLESAGPTDYLLPSCGII-ASAPRLGSRSQSASS 910

  Fly   878 EQVIRDLGPPDSTIVVH------VLESSATGDEDGPTIYDENVMSALITELSKMGEVTLVRYVED 936
            ..|  .:..|....|.|      .|||..........|:       .:|..:|..:|...|:|: 
  Rat   911 TDV--SIHAPSEATVGHGHELGKGLESPLKKSPSADNIH-------TLTGFAKPMDVYCQRFVQ- 965

  Fly   937 TMWVTFRDGESALNASSKKSIQVCGLDLILELKSKDWQHLVDSEIELCTTNTIPLCANPVEHAQL 1001
                   |.::.:||.|:..        .:...|::..|.                .|||.:.:.
  Rat   966 -------DAQNKMNALSEVR--------AVAQNSEEGNHK----------------TNPVSNEET 999

  Fly  1002 LQAITPELPQRPKQPPTRPPARPPMPMSPKNSPRHLPHVGVISIVPKPAKPPMPPQPQSQPLIPS 1066
            ......::|.||.|.........|..:|                    .:|..|...|..|...|
  Rat  1000 QSESVEQMPSRPSQLNVSCSVTGPQLLS--------------------VEPAHPAVSQKTPGSGS 1044

  Fly  1067 PLQPQVAPPRPPAMDTTPSSKSQ----SPTELVSAS----SSTSSSGKT------------SPTA 1111
            .|....|     .:..||||:|.    ||...:.:|    ::.:.:|.|            ||..
  Rat  1045 SLLDLEA-----GLCVTPSSESSSRAVSPFAKIRSSMVQVANITQAGLTHGINLAVAKVQKSPAE 1104

  Fly  1112 PAVLS 1116
            |.|::
  Rat  1105 PEVVN 1109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_569729.1 COG5329 61..493 CDD:227637 137/535 (26%)
INPP5c_Synj 538..863 CDD:197323 70/373 (19%)
DUF1866 862..1008 CDD:286093 24/151 (16%)
Inpp5fNP_001101024.2 COG5329 50..566 CDD:227637 138/537 (26%)
hSac2 593..695 CDD:463592 24/122 (20%)

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