DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and SPAC9G1.10c

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_593565.1 Gene:SPAC9G1.10c / 2542329 PomBaseID:SPAC9G1.10c Length:1191 Species:Schizosaccharomyces pombe


Alignment Length:448 Identity:132/448 - (29%)
Similarity:211/448 - (47%) Gaps:90/448 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 ARTIQNNLLDNSKQEAIDVLLVGSTLSSELADRARILLPSNMLHAPTTVLRELCKRYTEYVRPRM 537
            |:.:|...:.:|..:..|.|::|..|::|:.                       .|:.||.....
pombe   747 AKRLQVVSMASSVVKFWDGLMMGDWLATEMR-----------------------SRFPEYSNFTD 788

  Fly   538 ARVAVGTYNVNGGKHFRSIVFKDSLADWLLDCHALARSKALVDVNNPSENVDHPVDIYAIGFEEI 602
            ..:.:.::|....|.          :|  ||...:..|...:.:.:..    :| ||...||:|:
pombe   789 VSILICSWNAGASKP----------SD--LDSDTIGASMIPMMIRDNG----YP-DIVVFGFQEL 836

  Fly   603 VD-----LNASNIMAASTDNA------------KLWAEELQK---TISRDNDYVLLTYQQLVGVC 647
            ||     |.|.:|::.|:...            :||.|:|:.   .:|.::||.:|..:.|||:.
pombe   837 VDLENKRLTARSILSKSSSKGGSSNSANISSQYRLWREKLESEMMRVSSNDDYQVLVCENLVGLF 901

  Fly   648 LYIYIRPEHAPHIRDVAIDCVKTGLGGATGNKGACAIRFVLHGTSMCFVCAHFAAGQSQVAERNA 712
            ..::::.:....||.:....|||||||..|||||..:||::..||.|.|..|.|||||..|.||.
pombe   902 SCVFVKNKLQSKIRMLQSTTVKTGLGGLHGNKGAIVVRFLVDDTSYCIVNCHLAAGQSNKAARNN 966

  Fly   713 DYAEITRKLA-FPM---------------GRTLKSHDWVFWCGDFNYRIDMEKDELKECVRNGDL 761
            |.|.|....: ||.               |..:..|:.....||.||||:..:.:..:.::..|:
pombe   967 DLATILDNASLFPENDETDQLNTFVGGGDGSLIMDHEVCVLHGDLNYRINTLRPKALDLIKKNDI 1031

  Fly   762 STVLEFDQL--RKEQEAGNVFGEFLEGEITFDPTYKYDLFSDDYDTSEKQRAPAWTDRVLWRRRK 824
            .|:|:.|||  .:::.||.....|.|.||||.||||||:.|:.||:|||:|.|||.||:.:|   
pombe  1032 KTLLQSDQLLVERKRNAGFRLRTFTEPEITFAPTYKYDVHSEQYDSSEKKRVPAWCDRICYR--- 1093

  Fly   825 ALAEGDFAASAWNPGKLIHYGRSELKQSDHRPVIAIIDAEIMEIDQQRRRAVFEQVIR 882
              ...|:.::.       :|.|.|||.||||||.|:|.::...::.|.:.:.::.|.|
pombe  1094 --GSPDYISAE-------NYTRYELKASDHRPVSALIHSKAKMVNAQSQGSTWDVVKR 1142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532
INPP5c_Synj 538..863 CDD:197323 118/362 (33%)
DUF1866 862..1008 CDD:286093 3/21 (14%)
SPAC9G1.10cNP_593565.1 COG5411 281..794 CDD:227698 11/69 (16%)
IPPc 787..1126 CDD:214525 118/367 (32%)
UBA_TAP-C_like 1161..1186 CDD:270459
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5411
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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