DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Synj and SACM1L

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_001306000.1 Gene:SACM1L / 22908 HGNCID:17059 Length:609 Species:Homo sapiens


Alignment Length:514 Identity:155/514 - (30%)
Similarity:239/514 - (46%) Gaps:103/514 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 YGCLGALQLNAGESTVLFLVLVTGCVSMG--------KIGDIEIFRITQT----TFVSLQNAAPN 113
            :|.||.:.|.||.    :|:::|..:.:|        |..|.::....:|    |.:.||:   |
Human    58 FGILGTIHLVAGN----YLIVITKKIKVGEFFSHVVWKATDFDVLSYKKTMLHLTDIQLQD---N 115

  Fly   114 EDKISEVRKLLNSGTFYFAHTNASASASGASSYRFDITLCAQRRQQT----------QETDNRFF 168
            :..::.:..:||...|||:.|             :|:|...||...|          :..|.||.
Human   116 KTFLAMLNHVLNVDGFYFSTT-------------YDLTHTLQRLSNTSPEFQEMSLLERADQRFV 167

  Fly   169 WNRMMHIHLMRFGIDCQ----SWLLQAMCGSVEVRTVYIGAKQARAAIISRLSCERAGTRFNVRG 229
            ||.    ||:| .:..|    .:.|..:.|.:.:.:..|..|.....:|||.||.|||.|:.|||
Human   168 WNG----HLLR-ELSAQPEVHRFALPVLHGFITMHSCSINGKYFDWILISRRSCFRAGVRYYVRG 227

  Fly   230 TNDEGYVANFVETEQVIYVDGDVTSYVQTRGSVPLFWEQ---------PGV-QVGSHKVKLSRGF 284
            .:.||:.||||||||:::.:|...|:||||||:|:||.|         |.: :|.:|        
Human   228 IDSEGHAANFVETEQIVHYNGSKASFVQTRGSIPVFWSQRPNLKYKPLPQISKVANH-------- 284

  Fly   285 ETSAAAFDRHMSMMRQRYGYQTVVNLLGSSLVGSKEGEAMLSNEFQRHHGMSAHKDVPHVVFDYH 349
               ...|.||.......||.|.::|     |:..|..|..|...|...........:.::.||:|
Human   285 ---MDGFQRHFDSQVIIYGKQVIIN-----LINQKGSEKPLEQTFATMVSSLGSGMMRYIAFDFH 341

  Fly   350 QECRGGNFSALAKLKERIVACGANYGVFHA-SNGQVLREQFGVVRTNCLDCLDRTNCVQTYLGLD 413
            :||:...:..|:.|.:::.........|.. |.|||:..|.||.|:||:|||||||.:|:.|...
Human   342 KECKNMRWDRLSILLDQVAEMQDELSYFLVDSAGQVVANQEGVFRSNCMDCLDRTNVIQSLLARR 406

  Fly   414 TLGIQLE---ALKMGGKQQNISRFEEIFRQMWINNGNEVSKIYAGTGAI-----QGGSK-----L 465
            :|..||:   .|.:|.|.:....||:|::..|.:|.|..:|.||||||:     :.|.:     :
Human   407 SLQAQLQRLGVLHVGQKLEEQDEFEKIYKNAWADNANACAKQYAGTGALKTDFTRTGKRTHLGLI 471

  Fly   466 MDGARSAARTIQNNLLDNSKQEAIDVLLVGSTLSSELADRARILLPSNMLHAPTTVLRE 524
            |||..|..|..:||..|..:|::|| |.:|:....||..           |:|.:|.|:
Human   472 MDGWNSMIRYYKNNFSDGFRQDSID-LFLGNYSVDELES-----------HSPLSVPRD 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532 93/327 (28%)
INPP5c_Synj 538..863 CDD:197323
DUF1866 862..1008 CDD:286093
SACM1LNP_001306000.1 COG5329 57..513 CDD:227637 152/507 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D359616at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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