DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and Inpp5k

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_006532570.1 Gene:Inpp5k / 19062 MGIID:1194899 Length:472 Species:Mus musculus


Alignment Length:303 Identity:90/303 - (29%)
Similarity:143/303 - (47%) Gaps:29/303 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   578 LVDVNNPSENVDHPVDIYAIGFEE----IVDLNASNIMAASTDNAKLWAEELQKTISRDNDYVLL 638
            |:.:||...|    :|||.||.:|    |:.|.:.   ||..|.   |:......:|..| :|.:
Mouse    53 LLQLNNQDLN----LDIYIIGLQEMNFGIISLLSD---AAFEDP---WSSLFMDMLSPLN-FVKI 106

  Fly   639 TYQQLVGVCLYIYIRPEHAPHIRDVAIDCVKTGLGGATGNKGACAIRFVLHGTSMCFVCAHFAAG 703
            :..::.|:.|.::.:.:|.|:|:.::.....|||.|..||||...:...|:|..:..:..|....
Mouse   107 SQVRMQGLLLLVFAKYQHLPYIQIISTKSTPTGLYGYWGNKGGVNVCLKLYGYYVSIINCHLPPH 171

  Fly   704 QSQVAERNADYAEITRKLAF-----PMGRTLKSHDWVFWCGDFNYRI-DMEKDELKECVRNGDLS 762
            .....:|...:..|...|.|     |   .:..||.:.|.||.|:|| |.....::|.:......
Mouse   172 MYNNDQRLEHFDRILESLTFEGYDVP---NILDHDLILWFGDMNFRIEDFGLLFVQESITRKYYK 233

  Fly   763 TVLEFDQLRKEQEAGNVFGEFLEGEITFDPTYKYDLFSDDYDTSEKQRAPAWTDRVLWRRRKALA 827
            .:.|.|||...::...:..||.||.:.|.||||:|..|::||||||:|.||||||:|||.::..:
Mouse   234 ELWEKDQLFIAKKNDQLLREFQEGPLLFPPTYKFDRHSNNYDTSEKKRKPAWTDRILWRLKRQPS 298

  Fly   828 EGDFAASAWNPGKLI-----HYGRSELKQSDHRPVIAIIDAEI 865
            :....||:......:     :........|||:||....|.|:
Mouse   299 QASPLASSVPTSYFLLTLKNYVSHMAYSISDHKPVTGTFDLEL 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532
INPP5c_Synj 538..863 CDD:197323 88/299 (29%)
DUF1866 862..1008 CDD:286093 2/4 (50%)
Inpp5kXP_006532570.1 EEP 32..339 CDD:382041 88/299 (29%)
SKICH 350..454 CDD:375315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836200
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5411
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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