DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and Inpp5j

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_598246.1 Gene:Inpp5j / 171088 RGDID:620541 Length:1001 Species:Rattus norvegicus


Alignment Length:631 Identity:156/631 - (24%)
Similarity:236/631 - (37%) Gaps:169/631 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   593 DIYAIGFEEIVDLNASNIM-AASTDNAKLWAEELQKTISRDNDYVLLTYQQLVGVCLYIYIRPEH 656
            |:.|||.:|:..:....:. |..||.   |:|.....:...| :||::..::.||.|.::.:..|
  Rat   452 DMIAIGLQEVNSMINKRLKDALFTDQ---WSELFMDALGPFN-FVLVSTVRMQGVILLLFAKYYH 512

  Fly   657 APHIRDVAIDCVKTGLGGATGNKGACAIRFVLHGTSMCFVCAHFAAGQSQVAERNADYAEITRKL 721
            .|.:|||..||.:|||||..||||..::|....|..:||:..|..|...:..:|..::..|....
  Rat   513 LPFLRDVQTDCTRTGLGGYWGNKGGVSVRLAAFGHMLCFLNCHLPAHMDKAEQRKDNFQTILSLQ 577

  Fly   722 AF--PMGRTLKSHDWVFWCGDFNYRID-MEKDELKECVRNGDLSTVLEFDQLRKEQEAGNVFGEF 783
            .|  |....:..||.|||.||.|:||: .:...:|..:.:..|..:.|.|||...:....:...|
  Rat   578 QFQGPGAHGILDHDLVFWFGDLNFRIESYDLHFVKFAIDSNQLHQLWEKDQLNMAKNTWPILKGF 642

  Fly   784 LEGEITFDPTYKYDLFSDDYDTSEKQRAPAWTDRVLWRRRKALAEGDFAASAWNPGKL---IHYG 845
            .||.:.|.||:|:|:.::.||||.|:|.||||||:||:.:  ...|..:.|.....:|   .|..
  Rat   643 QEGPLNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVK--APSGGPSPSGRESHRLQVTQHSY 705

  Fly   846 RSELKQ--SDHRPVIAIIDAEIMEIDQQRRRAVFEQVIRDLGP------------PDSTIVVHVL 896
            ||.::.  |||:||.|              |.:.:...||..|            |:..:|.:.:
  Rat   706 RSHMEYTVSDHKPVAA--------------RFLLQFAFRDDVPLVRLEVADEWARPEQAVVRYRV 756

  Fly   897 ES-SATGDEDGPTIY---------------------DENVMSALITELS---KMGEVTLVRY--- 933
            |: .|....|...:|                     |.|:.....:|.|   ..|:..|..|   
  Rat   757 ETVFARSSWDWIGLYRVGFRHCKDYVAYVWAKHEEVDGNIYQVTFSEESLPKGHGDFILGYYSHH 821

  Fly   934 ------VEDTMWVTFRDGESALNASSKKSIQVCGLDLILELKSKDWQHLVDSEIELCTTNTIPLC 992
                  |.:...::....|||.:::........|.|              ||.:||..       
  Rat   822 HSILIGVTEPFQISLPTSESASSSTDSSGTSSEGED--------------DSTLELLA------- 865

  Fly   993 ANPVEHAQLLQAITPELPQRPKQPPTRPPARPPMPMSPKNSPRHLPHVGVISIVPKPAKPP---- 1053
                                       |.:|.|   ||..|.||......::..|..|..|    
  Rat   866 ---------------------------PKSRSP---SPGKSKRHRSRSPGLARFPSLALRPSSRE 900

  Fly  1054 -----MPPQPQSQPLIPSPLQPQVAPPRPPAMDTTPSSKSQSPTELVSASSSTSSSGKTSPTAPA 1113
                 ..|.|||:.|      |:|||.|..:                |.|..:|..|.:.|..|.
  Rat   901 RRGGSRSPSPQSRQL------PRVAPDRGHS----------------SGSRGSSEEGPSGPPGPW 943

  Fly  1114 VLSGPPTPPRQMQSKQATPVST----------PTRQVGSPKDPIPS 1149
            ..  ||..||.:....|..:.|          |.::...|....||
  Rat   944 AF--PPAVPRSLGLLPALRLETVDPGGGGSWGPDQEAPDPNSLSPS 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532
INPP5c_Synj 538..863 CDD:197323 92/278 (33%)
DUF1866 862..1008 CDD:286093 27/191 (14%)
Inpp5jNP_598246.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..130
RSXSXX motif 1 6..11
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..412
SH3-binding. /evidence=ECO:0000255 346..351
RSXSXX motif 2 351..356
INPP5c_INPP5J-like 418..725 CDD:197328 93/292 (32%)
Catalytic. /evidence=ECO:0000255 420..723 92/290 (32%)
Required for ruffle localization. /evidence=ECO:0000250 724..835 17/110 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 837..1001 46/226 (20%)
RSXSXX motif 3 869..874 3/7 (43%)
RSXSXX motif 4 880..885 0/4 (0%)
RSXSXX motif 5 906..911 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339889
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5411
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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