DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Synj and Inpp5j

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:NP_766027.2 Gene:Inpp5j / 170835 MGIID:2158663 Length:1003 Species:Mus musculus


Alignment Length:594 Identity:148/594 - (24%)
Similarity:230/594 - (38%) Gaps:153/594 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   593 DIYAIGFEEIVDLNASNIM-AASTDNAKLWAEELQKTISRDNDYVLLTYQQLVGVCLYIYIRPEH 656
            |:.|||.:|:..:....:. |..||.   |:|.....:...| :||::..::.||.|.::.:..|
Mouse   454 DMIAIGLQEVNSMINKRLKDALFTDQ---WSELFMDALGPFN-FVLVSTVRMQGVILLLFAKYYH 514

  Fly   657 APHIRDVAIDCVKTGLGGATGNKGACAIRFVLHGTSMCFVCAHFAAGQSQVAERNADYAEITRKL 721
            .|.:|||..||.:|||||..||||..::|....|..:||:..|..|...:..:|..::..|....
Mouse   515 LPFLRDVQTDCTRTGLGGYWGNKGGVSVRLAAFGHMLCFLNCHLPAHMDKAEQRKDNFQTILSLQ 579

  Fly   722 AF--PMGRTLKSHDWVFWCGDFNYRID-MEKDELKECVRNGDLSTVLEFDQLRKEQEAGNVFGEF 783
            .|  |....:..||.|||.||.|:||: .:...:|..:.:..|..:.|.|||...:....:...|
Mouse   580 QFQGPGAHGILDHDLVFWFGDLNFRIESYDLHFVKFAIDSNQLHQLWEKDQLNMAKNTWPILKGF 644

  Fly   784 LEGEITFDPTYKYDLFSDDYDTSEKQRAPAWTDRVLWRRRKALAEGDFAASAWNPGKL---IHYG 845
            .||.:.|.||:|:|:.::.||||.|:|.||||||:||:.:  ...|..:.|.....:|   .|..
Mouse   645 QEGPLNFAPTFKFDVGTNKYDTSAKKRKPAWTDRILWKVK--APSGGPSPSGRESHRLQVTQHSY 707

  Fly   846 RSELKQ--SDHRPVIAII--------DAEIMEIDQQRRRAVFEQVIRDLGPPDSTIVVHVLES-S 899
            ||.::.  |||:||.|..        |..::.:          :|..:...|:..:|.:.:|: .
Mouse   708 RSHMEYTVSDHKPVAAQFILQFAFRDDVPLVRL----------EVADEWARPEQAVVRYRVETVF 762

  Fly   900 ATGDEDGPTIY---------------------DENVMSALITELS---KMGEVTLVRY------- 933
            |....|...:|                     |.|:.....:|.|   ..|:..|..|       
Mouse   763 ARSSWDWIGLYRVGFRHCKDYVAYVWAKHEEVDGNIYQVTFSEESLPKGHGDFILGYYSHHHSIL 827

  Fly   934 --VEDTMWVTFRDGESALNASSKKSIQVCGLDLILELKSKDWQHLVDSEIELCTTNTIPLCANPV 996
              |.:...::....|||.:::........|.|              ||.:||..           
Mouse   828 IGVTEPFQISLPTSESASSSTDSSGTSSEGED--------------DSTLELLA----------- 867

  Fly   997 EHAQLLQAITPELPQRPKQPPTRPPARPPMPMSPKNSPRHLPHVGVISIVPKPAKPP-------- 1053
                                   |.:|.|   ||..|.||......::..|..|..|        
Mouse   868 -----------------------PKSRSP---SPGKSKRHRSRSPGLARFPSLALHPSSRERRGG 906

  Fly  1054 -MPPQPQSQPLIPSPLQPQVAPPRPPAMDTTPSSKSQSPTELVSASSSTSSSGKTSPTA-PAVLS 1116
             ..|.|||:.|      |:|||.|                   ..|||:..|.:..|:. |...:
Mouse   907 SRSPSPQSRQL------PRVAPDR-------------------GHSSSSRGSSEEGPSGLPGPWA 946

  Fly  1117 GPPTPPRQM 1125
            .||:.||.:
Mouse   947 FPPSVPRSL 955

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532
INPP5c_Synj 538..863 CDD:197323 92/286 (32%)
DUF1866 862..1008 CDD:286093 25/179 (14%)
Inpp5jNP_766027.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..110
RSXSXX motif 1 6..11
PHA03247 <50..337 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 147..414
SH3-binding. /evidence=ECO:0000255 346..351
RSXSXX motif 2 351..356
INPP5c_INPP5J-like 420..727 CDD:197328 92/278 (33%)
Catalytic. /evidence=ECO:0000255 422..725 92/276 (33%)
Required for ruffle localization 726..837 16/120 (13%)
SKICH 738..836 CDD:375315 15/107 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 839..1003 40/193 (21%)
RSXSXX motif 3 871..876 3/7 (43%)
RSXSXX motif 4 882..887 0/4 (0%)
RSXSXX motif 5 908..913 1/4 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836224
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5411
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.