DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Synj and Inpp5d

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_006529212.1 Gene:Inpp5d / 16331 MGIID:107357 Length:1196 Species:Mus musculus


Alignment Length:894 Identity:202/894 - (22%)
Similarity:319/894 - (35%) Gaps:286/894 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 VLLVGSTLSSELADRARILLPSNMLHAPTTVLRELCKRYTEYVRPRMARVAVGTYNVNGGKHFRS 555
            |:|| .|...::..:..:...|........:|:::..:::|...|.|..:.:||:|:......:.
Mouse   361 VILV-ETEKEKILRKEYVFADSKKREGFCQLLQQMKNKHSEQPEPDMITIFIGTWNMGNAPPPKK 424

  Fly   556 IVFKDSLADWLLDCHALARSKALVDVNNPSENVDH-PVDIYAIGFEEIVDLNASNIMAASTDNAK 619
            |      ..|.|       ||.  ......::.|: |.|||.||.:|            .....|
Mouse   425 I------TSWFL-------SKG--QGKTRDDSADYIPHDIYVIGTQE------------DPLGEK 462

  Fly   620 LWAEELQKTISRDNDYVLLT--YQQLVGVCLYIYIRPEHAPHIRDVAIDCVKTGLGGATGNKGAC 682
            .|.|.|:.::.........|  ...|..:.:.:..:|||...|..:..|.||||:....|||||.
Mouse   463 EWLELLRHSLQEVTSMTFKTVAIHTLWNIRIVVLAKPEHENRISHICTDNVKTGIANTLGNKGAV 527

  Fly   683 AIRFVLHGTSMCFVCAHFAAGQSQVAERNADYAEITRKLAF------PMGRTLK-SHDWVFWCGD 740
            .:.|:.:|||:.||.:|..:|..:...||.:|..|.|.||.      |...|.: :|  :||.||
Mouse   528 GVSFMFNGTSLGFVNSHLTSGSEKKLRRNQNYMNILRFLALGDKKLSPFNITHRFTH--LFWLGD 590

  Fly   741 FNYRIDM---EKDELKECVRNGDLSTVLEFDQLRKEQEAGNVFGEFLEGEITFDPTYKYDLFSDD 802
            .|||:::   |.:.:.:.::....|.:|..|||..|::...||..|.|.||||.|||:::..:.|
Mouse   591 LNYRVELPTWEAEAIIQKIKQQQYSDLLAHDQLLLERKDQKVFLHFEEEEITFAPTYRFERLTRD 655

  Fly   803 YDTSEKQRA-------PAWTDRVLWRRRKALAEGDFAASAWNPGKLIH-----YG-RSELKQSDH 854
            .....||:|       |:|.|||||:..                .|:|     || .|::..|||
Mouse   656 KYAYTKQKATGMKYNLPSWCDRVLWKSY----------------PLVHVVCQSYGSTSDIMTSDH 704

  Fly   855 RPVIAIIDAEIME---------------IDQQ--------------RRRAVF------------- 877
            .||.|..:|.:..               :|.|              :.:..|             
Mouse   705 SPVFATFEAGVTSQFVSKNVSHAPGPGTVDSQGQIEFLACYATLKTKSQTKFYLEFHSSCLESFV 769

  Fly   878 -------------EQVIR------DLGP----PDSTIVVHVLESSATGDEDGPTIYDENVMS--- 916
                         |.|:|      .|.|    |:..:..|:|.|..:.|.|  ..|.|..::   
Mouse   770 KSQEGENEEGSEGELVVRFGETLPKLKPIISDPEYLLDQHILISIKSSDSD--ESYGEGCIALRL 832

  Fly   917 -------ALITELSKMGEVTLVRYVEDTMWVTFRDGESALNASSKK------------SIQVCGL 962
                   .:.|.|:..||:|          ..|| ||..|..|..|            ..:..|:
Mouse   833 ETTEAQHPIYTPLTHHGEMT----------GHFR-GEIKLQTSQGKMREKLYDFVKTERDESSGM 886

  Fly   963 DLILELKSKD----WQHLVDSEIELCTTNTIPLCANP-----------------VEHAQLLQAIT 1006
            ..:..|.|.|    |:  ....:..|..:::....||                 :...|.|.|.:
Mouse   887 KCLKNLTSHDPMRQWE--PSGRVPACGVSSLNEMINPNYIGMGPFGQPLHGKSTLSPDQQLTAWS 949

  Fly  1007 -PELPQ-------RPKQPPTRPPARPPMPMSPKN----------SPR------------------ 1035
             .:||:       |.:.||| ||::|  |:|||.          .||                  
Mouse   950 YDQLPKDSSLGPGRGEGPPT-PPSQP--PLSPKKFSSSTANRGPCPRVQEARPGDLGKVEALLQE 1011

  Fly  1036 ----------HLPHVGVISIVPK--PAK----PPM-----PPQPQSQPLIPSPLQPQVAPPRPPA 1079
                      ..|..|.:|..||  |.|    |.|     ||.|.     |....|.:..|:...
Mouse  1012 DLLLTKPEMFENPLYGSVSSFPKLVPRKEQESPKMLRKEPPPCPD-----PGISSPSIVLPKAQE 1071

  Fly  1080 MDTTPSSKSQSPTELV-------SASSSTSSSGK--------------TSPTAPAVLSGPPTPPR 1123
            :::...:..|:|..::       |.:.|:|:.|:              .|..||..:..|..|.|
Mouse  1072 VESVKGTSKQAPVPVLGPTPRIRSFTCSSSAEGRMTSGDKSQGKPKASASSQAPVPVKRPVKPSR 1136

  Fly  1124 QMQSKQATPVSTPTRQVGSPKDPIPSDTAYETASNIYEEIQEDVPAPRH 1172
            ...|:|.||:..|     .|..|:.|....:...:...:.:::...|.|
Mouse  1137 SEMSQQTTPIPAP-----RPPLPVKSPAVLQLQHSKGRDYRDNTELPHH 1180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532
INPP5c_Synj 538..863 CDD:197323 101/350 (29%)
DUF1866 862..1008 CDD:286093 40/254 (16%)
Inpp5dXP_006529212.1 SH2_SHIP 4..105 CDD:198206
INPP5c_SHIP1-INPP5D 407..713 CDD:197334 101/350 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836220
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5411
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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