DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and Inpp5b

DIOPT Version :10

Sequence 1:NP_569729.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_006502867.1 Gene:Inpp5b / 16330 MGIID:103257 Length:994 Species:Mus musculus


Alignment Length:609 Identity:174/609 - (28%)
Similarity:274/609 - (44%) Gaps:93/609 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 GARSAARTIQNNLLDNSKQEAIDVLLVGSTLSSELADRARILLPSNMLHAPTTVLRELCKRYTEY 532
            |||...:. :|:|...:|.:: |:.....:.:..::|:|.||.........|.|...|.::...|
Mouse   278 GARCPEKP-ENSLTRQNKSKS-DMSEKVRSATVTVSDKAHILSVQKFGLRDTIVRSHLVQKEENY 340

  Fly   533 VRPRMARVAVGTYNVNGGKHFRSIVFKDSLADWLLDCH-ALARSKALVDVNNPSENVDHPVDIYA 596
            ...:..|..||||||||...      |:.|..||  .| |||                  .|:|.
Mouse   341 TYIQNFRFFVGTYNVNGQSP------KECLRPWL--SHSALA------------------PDVYC 379

  Fly   597 IGFEEIVDLNASNIMAASTDNAKLWAEELQKTISRDNDYVLLTYQQLVGVCLYIYIRPEHAPHIR 661
            :||:|: ||:........|...:.|.:.:.:::..|..|..:.:.:|||:.|.:|::.|||.:|.
Mouse   380 VGFQEL-DLSKEAFFFHDTPKEEEWFKAVSESLHPDAKYAKVKFVRLVGIMLLLYVKQEHAAYIS 443

  Fly   662 DVAIDCVKTGLGGATGNKGACAIRFVLHGTSMCFVCAHFAAGQSQVAERNADYAEITRKLAFPM- 725
            :|..:.|.||:.|..||||..||||.||.||:|.|.:|.||...:...||.||.:|..::.||. 
Mouse   444 EVEAETVGTGIMGRMGNKGGVAIRFQLHNTSICVVNSHLAAHTEEYERRNQDYRDICSRMQFPQV 508

  Fly   726 -----GRTLKSHDWVFWCGDFNYRI-DMEKDELKECVRNGDLSTVLEFDQLRKEQEAGNVFGEFL 784
                 ..|:..||.:.|.||.|||| :::..::|:.|......|:...|||:.:..|..:|..|.
Mouse   509 DPSQPPLTINKHDVILWLGDLNYRIEELDVGKVKKLVEEKAFQTLYAHDQLKIQVAARTIFDGFT 573

  Fly   785 EGEITFDPTYKYDLFSDDYDTSEKQRAPAWTDRVLWRRRKALAEGDFAASAWNPGKLIHYGRSEL 849
            ||||||.||||||..|||:|||||.|||||.||:||:.:             |..:|.:.....|
Mouse   574 EGEITFQPTYKYDTGSDDWDTSEKCRAPAWCDRILWKGK-------------NITQLSYQSHMAL 625

  Fly   850 KQSDHRPVIAIIDAEIMEIDQQRRRAVFEQVIRDLGPPDSTIVVHVLESSATG----------DE 904
            |.|||:||.::.|..:..::::..|...|:::|.|...::..:..|..|....          ..
Mouse   626 KTSDHKPVSSVFDIGVRVVNEELYRKTLEEIVRSLDKMENANIPSVTLSKREFCFENVKYMQLQT 690

  Fly   905 DGPTIYDENVMSALITELSKMGEVTLVRYVEDTMWVTFRDGESALNASSKKSIQV---------- 959
            :..||::..| ......::|..|.:..:     .|:|.|..:..|...|...|::          
Mouse   691 ESFTIHNSQV-PCQFEFINKPDEESYCK-----QWLTARPSKGFLLPDSHVEIELELFVNKSTAT 749

  Fly   960 ---CGLD-----LILEL-KSKDWQHLVDSEIELCTTNTIPLC-ANPVEHAQLLQAITPELPQRPK 1014
               .|.|     |:|.| :.||:...|..       |.:|.| .:|:.....::....:||.:..
Mouse   750 KLNSGKDTIEDILVLHLERGKDYFLSVSG-------NYLPSCFGSPIHTLCYMREPILDLPLKTV 807

  Fly  1015 QPPTRPPARPPMPMSPKNSPRHLP 1038
            ...|....:.....|...:|..:|
Mouse   808 SDLTLMSVQTADDRSQLENPMEIP 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_569729.1 COG5329 61..493 CDD:227637 7/24 (29%)
INPP5c_Synj 538..863 CDD:197323 123/332 (37%)
DUF1866 862..1008 CDD:286093 30/175 (17%)
Inpp5bXP_006502867.1 INPP5B_PH 1..147 CDD:465268
INPP5c_INPP5B 346..639 CDD:197327 123/332 (37%)
RhoGAP_OCRL1 773..991 CDD:239845 11/66 (17%)
Blue background indicates that the domain is not in the aligned region.

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