| Sequence 1: | NP_001246454.1 | Gene: | Synj / 37517 | FlyBaseID: | FBgn0034691 | Length: | 1218 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_011244377.1 | Gene: | Synj1 / 104015 | MGIID: | 1354961 | Length: | 1714 | Species: | Mus musculus |
| Alignment Length: | 1343 | Identity: | 632/1343 - (47%) |
|---|---|---|---|
| Similarity: | 823/1343 - (61%) | Gaps: | 174/1343 - (12%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MAMSKVIRVLEKSIAPSPHSVLLEHRNKSDSILFESHAVALLTQQETDVIRKQYTKVCDAYGCLG 65
Fly 66 ALQLNAGESTVLFLVLVTGCVSMGKIGDIEIFRITQTTFVSLQNAAPNEDKISEVRKLLNSGTFY 130
Fly 131 FAHTNASASASGASSYRFDITLCAQRRQQTQETDNRFFWNRMMHIHLMRFGIDCQSWLLQAMCGS 195
Fly 196 VEVRTVYIGAKQARAAIISRLSCERAGTRFNVRGTNDEGYVANFVETEQVIYVDGDVTSYVQTRG 260
Fly 261 SVPLFWEQPGVQVGSHKVKLSRGFETSAAAFDRHMSMMRQRYGYQTVVNLLGSSLVGSKEGEAML 325
Fly 326 SNEFQRHHGMSAH-KDVPHVVFDYHQECRGGNFSALAKLKERIVACGANYGVFHASNGQVLREQF 389
Fly 390 GVVRTNCLDCLDRTNCVQTYLGLDTLGIQLEALKMGGKQQNISRFEEIFRQMWINNGNEVSKIYA 454
Fly 455 GTGAIQG---GSKLMDGARSAARTIQNNLLDNSKQEAIDVLLVGSTLSSELADRARILLPSNMLH 516
Fly 517 --------APTTVLRELCKRYTEYVRPRMARVAVGTYNVNGGKHFRSIVFKD-SLADWLLDCHAL 572
Fly 573 ARSKALVDVNNPSENVDHPVDIYAIGFEEIVDLNASNIMAASTDNAKLWAEELQKTISRDNDYVL 637
Fly 638 LTYQQLVGVCLYIYIRPEHAPHIRDVAIDCVKTGLGGATGNKGACAIRFVLHGTSMCFVCAHFAA 702
Fly 703 GQSQVAERNADYAEITRKLAFPMGRTLKSHDWVFWCGDFNYRIDMEKDELKECVRNGDLSTVLEF 767
Fly 768 DQLRKEQEAGNVFGEFLEGEITFDPTYKYDLFSDDYDTSEKQRAPAWTDRVLWRRRK-------- 824
Fly 825 --ALAEGDFAASA-----WNPGKLIHYGRSELKQSDHRPVIAIIDAEIMEIDQQRRRAVFEQVIR 882
Fly 883 DLGPPDSTIVVHVLESSATGDEDGPTIYDENVMSALITELSKMGEVTLVRYVEDTMWVTFRDGES 947
Fly 948 ALNASSKKSIQVCGLDLILELKSKDWQHLVDSEIELCTTN-TIPLCA------------------ 993
Fly 994 ------------------------------------NPVEHAQLLQAITPELPQRPKQPPTRPPA 1022
Fly 1023 RP--------PMPMSPKNSPRHLPHVGVISIVPKPAKPPMPPQPQSQPLIPSPLQPQVAPPRPPA 1079
Fly 1080 MDTTPSSKS-------QSP---TELVSASSSTSSS-----GKTSPTAPAVLSGP---------PT 1120
Fly 1121 PPRQMQSKQATPVSTPTRQ----VGSP---KDPIPSDTAYETASNIYEEIQEDVPAPRH---PPP 1175
Fly 1176 A----GPPPVIGAPMGPPP-PLPNRRGPPPIPNRSGNAPPLPT 1213 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Synj | NP_001246454.1 | Syja_N | 61..353 | CDD:280532 | 177/292 (61%) |
| INPP5c_Synj | 538..863 | CDD:197323 | 211/340 (62%) | ||
| DUF1866 | 862..1008 | CDD:286093 | 47/200 (24%) | ||
| Synj1 | XP_011244377.1 | COG5329 | 204..627 | CDD:227637 | 255/435 (59%) |
| INPP5c_Synj1 | 680..1015 | CDD:197332 | 211/340 (62%) | ||
| RRM_SF | 1014..1155 | CDD:388407 | 46/145 (32%) | ||
| PHA03247 | <1207..1609 | CDD:223021 | 73/256 (29%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167836196 | |
| Domainoid | 1 | 1.000 | 406 | 1.000 | Domainoid score | I705 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5411 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H48252 | |
| Inparanoid | 1 | 1.050 | 1109 | 1.000 | Inparanoid score | I228 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG48338 | |
| OrthoDB | 1 | 1.010 | - | - | D359616at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0002172 | |
| OrthoInspector | 1 | 1.000 | - | - | otm43870 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101787 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR11200 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1445 |
| SonicParanoid | 1 | 1.000 | - | - | X1883 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 17 | 16.800 | |||||