DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Synj and inpp5f

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_031761377.1 Gene:inpp5f / 100379801 XenbaseID:XB-GENE-1008490 Length:1106 Species:Xenopus tropicalis


Alignment Length:1344 Identity:274/1344 - (20%)
Similarity:473/1344 - (35%) Gaps:405/1344 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 HSVLLEHRNKSDSILFESHAVALLTQQETDVIRKQYTKVCDAY--GCLGALQLNAGESTVLFLV- 80
            |.:|    .:.:|.|:.|.....||.:....:...:..:|...  |.:|.:||:......|.|: 
 Frog     9 HYIL----QRGESALWCSRQDGSLTSRAATDLLLAWNPICLGLVEGIIGKVQLHTDLPWWLLLIR 69

  Fly    81 ------LVTGCVSMGKIG-------------DIEI-------------FRITQT----------- 102
                  ::.|...:.||.             |:|:             .:|||:           
 Frog    70 QKSLIGILPGGHEIYKINKIAAIPLSGAEPQDLELELCKKHHFGINKPEKITQSPDDSKFLMKTL 134

  Fly   103 TFVSLQNAAPNEDKISE-------VRKLL--------NSGTFYFAHTNASASASGASSYRFDITL 152
            |.:....:||.:.|:.|       .|:||        :|.:||:             |:.:|:|.
 Frog   135 TQIKSNVSAPAKKKVKESKEKERLERRLLEELFKMFMDSDSFYY-------------SWTYDLTS 186

  Fly   153 CAQRRQQT--------QETDNRFFWNRMMHIHLMRFGIDCQS-----WLLQAMCGSVEVRTVYIG 204
            ..||:...        |..|:|||||:    |:::..||.:.     |:|..:.|.|::..:.:.
 Frog   187 SVQRQSSREKSDLLLWQTVDDRFFWNK----HMIQDLIDIKDPQGSVWILPIIQGFVQIEELVVN 247

  Fly   205 AKQA-------------------------RAAIISRLSCERAGTRFNVRGTNDEGYVANFVETEQ 244
            ..::                         ..|:|||.|..|||.|:..||.:..|:|||:|||||
 Frog   248 YNESSDDEKSSPETPPQEPTCVDDIHPRFMVALISRRSRHRAGMRYKRRGVDKFGHVANYVETEQ 312

  Fly   245 VIYVDGDVTSYVQTRGSVPLFWEQPGVQVGSHKVKLSRGFETSAAAFDRHMSMMRQRYGYQTVVN 309
            :|:|.....|:||||||||:||.|.|.:. :.:.:|.:..:.::..|..|.:.....|..|.::|
 Frog   313 LIHVHNHTLSFVQTRGSVPVFWSQVGYRY-NPRPRLDKSEKETSQYFALHFNQELGIYQKQVIIN 376

  Fly   310 LLGSSLVGSKEGEAMLSNEFQRHHGMSAHKDVPHVVFDYHQECRGGNFSALAKLKERIVACGANY 374
                 ||.....|.::.:.:.:...|..:.::.:|.||:|:.|||..|..:..|.:.|.....:.
 Frog   377 -----LVDQAGREKIIGDAYLKQVLMFNNPNLTYVTFDFHEHCRGMKFENVQTLTDAISDIIVDM 436

  Fly   375 GVFHASNGQVLREQFGVVRTNCLDCLDRTNCVQTYLGLDTLGIQLEALKMGGKQQNI-SRFEEIF 438
            .........|:.:|.|:.|.||:|||||||.||..:....:..||:.|.:...:|.: .:...::
 Frog   437 KWCWVDQAGVICKQEGIFRVNCMDCLDRTNVVQAAVARVIMEHQLKKLGVMPPEQPLPMKCYRLY 501

  Fly   439 RQMWINNGNEVSKIYAGTGAIQG-----GSK-----LMDGARSAARTIQNNLLDNSKQEAIDVLL 493
            :.||.|||:.:|:.||||.|::|     |.:     :.||..||.|...|...|..:|..|| |:
 Frog   502 QIMWANNGDSISRQYAGTAALKGDFTRTGERKLAGVMKDGVNSANRYYLNRFKDAYRQAVID-LM 565

  Fly   494 VGSTLSSELADRARILLPSNMLHAPT-----TVLRELCKRYTEYVRPRMARVAVGTYNVNGGKHF 553
            .|..::.:|............||..:     .::.:|.:.|.:.:.|       .....:||   
 Frog   566 QGIPVTEDLYSIFTKEKEHEALHRESQRNHHELINQLLQNYMQMLLP-------DDEKFHGG--- 620

  Fly   554 RSIVFKDSLADW-LLDCHALARSKALVDVNNPSENVDHPVDIYAIGFEEIVDLNASNIMAASTDN 617
                       | |:||     ..:|:|..:      ..|::..:                 ..|
 Frog   621 -----------WALIDC-----DPSLIDATH------RDVEVLLL-----------------LSN 646

  Fly   618 AKLWAEELQKTISRDNDYVLLTYQQLVGVCLYIYIRPEHAPHIRDVAIDCVKTGLGGATGNKGAC 682
            ...:.......|.:.|.|..|:.:.|.    .|.|.|| ..........|::... ...||.|..
 Frog   647 CAYYVAYYDDEIDKVNQYQRLSLEDLE----RIEIGPE-PTFFGKPKFSCMRLHY-KYKGNSGYF 705

  Fly   683 -AIRFVLHG-------TSMCFVCAHFAAGQSQVAERNADYAEITRKLAFPMGRTLKSHDWVFWCG 739
             .:|.|...       |.:|.  |.......|..|  .|...|.:||.   .::.|.|:.:....
 Frog   706 HTLRAVTRNPDEDGKDTLLCI--AEMLRLTKQALE--LDVPVIEKKLE---RKSSKPHEEIIGIR 763

  Fly   740 DFNYRIDMEKDELKECVRNGDLSTVLEFDQLRKEQEAGNV--FGEF--LEGEITFDPTYKYDLFS 800
            ..:.|:.:....|.:. :|..:|.....:|..|:...|::  .|.|  .:|:....|..:.:::.
 Frog   764 SRSQRLGLNSMGLAQS-KNFLMSKFSSLNQKVKQTNIGSLRKLGGFNKPDGKGVLAPNLQANMWK 827

  Fly   801 DDYDTSEKQRAPAWTDRVLWRRRKALAEGDFAASAWNPGKLIHYGRSELKQSDHRPVIAIIDAEI 865
            .|                              :|..|||       :::|               
 Frog   828 SD------------------------------SSLDNPG-------TDIK--------------- 840

  Fly   866 MEIDQQRRRAVFEQVIRDLGPPDSTIVVHVLESSATGDEDGPTIYDENVMSALITELSKMGEVTL 930
                               |.|:|.:.:.....|...|:......:|:..||  ..|..||:...
 Frog   841 -------------------GHPESDLDISTDSESFHSDDFLTKSDEEDGQSA--GALENMGQTDY 884

  Fly   931 VRYVEDTMWVTFRDGESALNASSKKSIQVCGLDLIL--------ELKSKDWQHLVDSEIEL--CT 985
            |                         :..||:.:.:        .:.|.|:.....:||.:  |.
 Frog   885 V-------------------------LPSCGIIVSVPRLGSRSHSVSSADFNPPNPTEIHVTECE 924

  Fly   986 TNTIPLCANPVEHAQLLQAITPELPQRPK-----QPPTRPPARPPMPMSPKNSPRHLPHVGVISI 1045
            ....|.....|:....:.|...:.....:     ..|....|:.....|..|||:          
 Frog   925 EQDPPQTEALVDFGTPIDAYCHQFVHDAQTKGNLNEPDSKEAQLDQETSSNNSPK---------- 979

  Fly  1046 VPKPAKPPMPPQPQSQPLIPSPLQPQV-APPRPPAMDTTPSSKSQSPTELVSASSSTSSSGKTSP 1109
                              ||:||:... ..|||..:|.:.:|.:   ::|:              
 Frog   980 ------------------IPAPLESDAELIPRPSQLDVSHNSAN---SQLL-------------- 1009

  Fly  1110 TAPAVLSGPPTPPRQMQSKQATPVSTPTRQVGSPKDPIPSDTAYETASNIYEEIQEDVPAPRHPP 1174
                    |..||:..:|.:|:|.|..|      ..|.|:|::...|.:.:.:|:..|....:..
 Frog  1010 --------PVEPPQLSKSGRASPASAST------SAPSPADSSSSRAVSPFAKIRSSVVQVANIT 1060

  Fly  1175 PAGPPPVIGAPMGPPPPLPNRRGPPPIPNRSGNAPPLPTRPANN 1218
            .||....|...:...     ::.|.|      ||||.|  |.|:
 Frog  1061 QAGLTQGINFAVAKV-----QKSPDP------NAPPEP--PQND 1091

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532 93/390 (24%)
INPP5c_Synj 538..863 CDD:197323 53/337 (16%)
DUF1866 862..1008 CDD:286093 22/155 (14%)
inpp5fXP_031761377.1 COG5329 50..567 CDD:227637 142/540 (26%)
hSac2 597..697 CDD:403601 23/154 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D359616at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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