DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and inpp5jb

DIOPT Version :10

Sequence 1:NP_569729.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_002662241.3 Gene:inpp5jb / 100317089 ZFINID:ZDB-GENE-081104-46 Length:657 Species:Danio rerio


Alignment Length:637 Identity:161/637 - (25%)
Similarity:251/637 - (39%) Gaps:151/637 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   496 STLSSELADRARILLPSNMLHAPTT-----VLRELCKRYTEYVRPRMA---RVAVGTYNVNGGKH 552
            |...|.::.||..|..:.....|:|     ..|.|....|...:|::|   |:.:.|:||.... 
Zfish    96 SVARSHISMRAASLPQAPSYKPPSTESVVHPQRALSVAGTADTQPQVAEDFRIHIVTWNVGSAM- 159

  Fly   553 FRSIVFKDSLADWLLDCHALARSKALVDVNNPSENV---------DHPVDIYAIGFEEI---VDL 605
                                           |.|::         |...|:|.||.:|:   ::.
Zfish   160 -------------------------------PPEDITNLLGLNVGDGNTDMYIIGLQEVNSMINK 193

  Fly   606 NASNIMAASTDNAKLWAEELQKTISRDNDYVLLTYQQLVGVCLYIYIRPEHAPHIRDVAIDCVKT 670
            ...:::  .||.   |:|.....:| ...|||.|.|::.|:.|.::.:..|.|.:|.:.....:|
Zfish   194 RLKDVL--FTDQ---WSEVCMDALS-PFGYVLATSQRMQGMLLLVFAKYFHLPFLRGIQTQTTRT 252

  Fly   671 GLGGATGNKGACAIRFVLHGTSMCFVCAHFAAGQSQVAERNADYAEITRKLAFPMGRT---LKSH 732
            ||||..||||..:.|..:.|.|:||:..|..|......:|..|:..|.::..|. |:.   :..|
Zfish   253 GLGGIWGNKGGVSARMTVFGHSICFLNCHLPAHMENTEQRMEDFESILQQQQFD-GQAATGVLDH 316

  Fly   733 DWVFWCGDFNYRI-DMEKDELKECVRNGDLSTVLEFDQLRKEQEAGNVFGEFLEGEITFDPTYKY 796
            |.|||.||.|:|| |:|...:|..:.|..||.:.|.|||...:::..|...|.||.:.|.||||:
Zfish   317 DVVFWFGDLNFRIEDLEMQVVKGAIDNNKLSVLWEKDQLNIAKDSETVLEGFHEGPLKFPPTYKF 381

  Fly   797 DLFSDDYDTSEKQRAPAWTDRVLWRRRKALAEGDFAA-----SAWNPGKLI--HYGRSELKQ--S 852
            |:.:|.||||.|:|.||||||:|||.|......:..:     |....|..:  |:.||.::.  |
Zfish   382 DVGTDTYDTSGKKRMPAWTDRILWRLRPMAQVSNSTSKRSSLSGLTSGTRVSQHFYRSHMEYTVS 446

  Fly   853 DHRPVIAIIDAEI-MEIDQQRRRAVFEQVIRDLGPPDSTIVVHVLESSATGDEDGPTIYDENVMS 916
            ||:||.::...:. .::|........|...|::.  |:.....|..:.|....|...||      
Zfish   447 DHKPVSSVFTLQFPYKVDMPLVTIFVEDEWREIS--DAVAKFKVAPNFARSSWDWIGIY------ 503

  Fly   917 ALITELSKMGEVTLVRYVEDTMWV-----TFRDGESALNASSKKSIQVCGLDLILELKSKDWQHL 976
                   |:|......||..| |.     .|...|..:|.:.::..:..| |.||...|.:...:
Zfish   504 -------KVGFKHHKDYVAYT-WAKQEESDFLRQEHQVNFTEEELPKESG-DFILGYYSNNTSSI 559

  Fly   977 V----------------------------DSEIELCTT-NTIPLCANPVEHAQLLQAITPELPQR 1012
            |                            |.|::...: ::.|...:||         :..|.:.
Zfish   560 VGITEPFQIQLPASAAAGLSPSDSSDFTSDDEVKKPDSGDSSPETEDPV---------SSRLTEE 615

  Fly  1013 PKQPPTRPPARPPMPMSPKNSPRHLPHVGVISIVP--------KPAKPPMPP 1056
            ....|:||.||          |||..|....::.|        |.|..|..|
Zfish   616 QMAKPSRPHAR----------PRHGKHHAGSAVQPSDEPENSGKAAAEPEEP 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_569729.1 COG5329 61..493 CDD:227637
INPP5c_Synj 538..863 CDD:197323 106/352 (30%)
DUF1866 862..1008 CDD:286093 29/180 (16%)
inpp5jbXP_002662241.3 INPP5c_INPP5J-like 146..457 CDD:197328 105/349 (30%)
SKICH 468..568 CDD:465482 23/116 (20%)
Blue background indicates that the domain is not in the aligned region.

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