DRSC/TRiP Functional Genomics Resources

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Protein Alignment Synj and inpp5jb

DIOPT Version :9

Sequence 1:NP_001246454.1 Gene:Synj / 37517 FlyBaseID:FBgn0034691 Length:1218 Species:Drosophila melanogaster
Sequence 2:XP_002662241.3 Gene:inpp5jb / 100317089 ZFINID:ZDB-GENE-081104-46 Length:657 Species:Danio rerio


Alignment Length:637 Identity:161/637 - (25%)
Similarity:251/637 - (39%) Gaps:151/637 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   496 STLSSELADRARILLPSNMLHAPTT-----VLRELCKRYTEYVRPRMA---RVAVGTYNVNGGKH 552
            |...|.::.||..|..:.....|:|     ..|.|....|...:|::|   |:.:.|:||.... 
Zfish    96 SVARSHISMRAASLPQAPSYKPPSTESVVHPQRALSVAGTADTQPQVAEDFRIHIVTWNVGSAM- 159

  Fly   553 FRSIVFKDSLADWLLDCHALARSKALVDVNNPSENV---------DHPVDIYAIGFEEI---VDL 605
                                           |.|::         |...|:|.||.:|:   ::.
Zfish   160 -------------------------------PPEDITNLLGLNVGDGNTDMYIIGLQEVNSMINK 193

  Fly   606 NASNIMAASTDNAKLWAEELQKTISRDNDYVLLTYQQLVGVCLYIYIRPEHAPHIRDVAIDCVKT 670
            ...:::  .||.   |:|.....:| ...|||.|.|::.|:.|.::.:..|.|.:|.:.....:|
Zfish   194 RLKDVL--FTDQ---WSEVCMDALS-PFGYVLATSQRMQGMLLLVFAKYFHLPFLRGIQTQTTRT 252

  Fly   671 GLGGATGNKGACAIRFVLHGTSMCFVCAHFAAGQSQVAERNADYAEITRKLAFPMGRT---LKSH 732
            ||||..||||..:.|..:.|.|:||:..|..|......:|..|:..|.::..|. |:.   :..|
Zfish   253 GLGGIWGNKGGVSARMTVFGHSICFLNCHLPAHMENTEQRMEDFESILQQQQFD-GQAATGVLDH 316

  Fly   733 DWVFWCGDFNYRI-DMEKDELKECVRNGDLSTVLEFDQLRKEQEAGNVFGEFLEGEITFDPTYKY 796
            |.|||.||.|:|| |:|...:|..:.|..||.:.|.|||...:::..|...|.||.:.|.||||:
Zfish   317 DVVFWFGDLNFRIEDLEMQVVKGAIDNNKLSVLWEKDQLNIAKDSETVLEGFHEGPLKFPPTYKF 381

  Fly   797 DLFSDDYDTSEKQRAPAWTDRVLWRRRKALAEGDFAA-----SAWNPGKLI--HYGRSELKQ--S 852
            |:.:|.||||.|:|.||||||:|||.|......:..:     |....|..:  |:.||.::.  |
Zfish   382 DVGTDTYDTSGKKRMPAWTDRILWRLRPMAQVSNSTSKRSSLSGLTSGTRVSQHFYRSHMEYTVS 446

  Fly   853 DHRPVIAIIDAEI-MEIDQQRRRAVFEQVIRDLGPPDSTIVVHVLESSATGDEDGPTIYDENVMS 916
            ||:||.::...:. .::|........|...|::.  |:.....|..:.|....|...||      
Zfish   447 DHKPVSSVFTLQFPYKVDMPLVTIFVEDEWREIS--DAVAKFKVAPNFARSSWDWIGIY------ 503

  Fly   917 ALITELSKMGEVTLVRYVEDTMWV-----TFRDGESALNASSKKSIQVCGLDLILELKSKDWQHL 976
                   |:|......||..| |.     .|...|..:|.:.::..:..| |.||...|.:...:
Zfish   504 -------KVGFKHHKDYVAYT-WAKQEESDFLRQEHQVNFTEEELPKESG-DFILGYYSNNTSSI 559

  Fly   977 V----------------------------DSEIELCTT-NTIPLCANPVEHAQLLQAITPELPQR 1012
            |                            |.|::...: ::.|...:||         :..|.:.
Zfish   560 VGITEPFQIQLPASAAAGLSPSDSSDFTSDDEVKKPDSGDSSPETEDPV---------SSRLTEE 615

  Fly  1013 PKQPPTRPPARPPMPMSPKNSPRHLPHVGVISIVP--------KPAKPPMPP 1056
            ....|:||.||          |||..|....::.|        |.|..|..|
Zfish   616 QMAKPSRPHAR----------PRHGKHHAGSAVQPSDEPENSGKAAAEPEEP 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SynjNP_001246454.1 Syja_N 61..353 CDD:280532
INPP5c_Synj 538..863 CDD:197323 106/352 (30%)
DUF1866 862..1008 CDD:286093 29/180 (16%)
inpp5jbXP_002662241.3 INPP5c_INPP5J-like 146..457 CDD:197328 105/349 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579683
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5411
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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