DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlcT and Ugcg

DIOPT Version :9

Sequence 1:NP_611636.1 Gene:GlcT / 37516 FlyBaseID:FBgn0067102 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_113983.1 Gene:Ugcg / 83626 RGDID:621870 Length:394 Species:Rattus norvegicus


Alignment Length:395 Identity:205/395 - (51%)
Similarity:272/395 - (68%) Gaps:7/395 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHLPLPLYGFAAFFMVFWLGTWMVHVIAICYGRYKLHKKSCKLPTEAQP---LPGVSILKPLMG 62
            |:.|.|...|.|.|..|.::..|::|.::|.|.|..|:||:    |:.||   |||||:||||.|
  Rat     1 MALLDLAQEGMALFGFVLFVVLWLMHFMSIIYTRLHLNKKA----TDKQPYSKLPGVSLLKPLKG 61

  Fly    63 VDPNLQHNLETFFTMDYPLYELLFCVEDKEDPAIQLVERLLAKYPLVDAALFVGGSDVGVNPKIN 127
            |||||.:||||||.:|||.||:|.||:|.:||||::.::||.|||.|||.||:||..||:|||||
  Rat    62 VDPNLINNLETFFELDYPKYEVLLCVQDHDDPAIEVCKKLLGKYPNVDARLFIGGKKVGINPKIN 126

  Fly   128 NIHPGYMAAKYDFVMISDSGIKMKDDTLLDMVQNMSEKHALVHQMPFTCDRDGFAATFEKVFFGT 192
            |:.|.|..||||.:.|.||||::..|||.|||..|:|:..|||.:|:..||.|||||.|:|:|||
  Rat   127 NLMPAYEVAKYDLIWICDSGIRVIPDTLTDMVNQMTERVGLVHGLPYVADRQGFAATLEQVYFGT 191

  Fly   193 VQSRIYLSADVLGINCHTGMSCLLRKAVIDQLGGLRAFGCYLAEDFFIARSVTRLGWKMRISNQP 257
            ...|.|:||:|.|..|.||||||:||.|:||.|||.||..|:|||:|:|:::...|||..:|.|.
  Rat   192 SHPRSYISANVTGFKCVTGMSCLMRKDVLDQAGGLIAFAQYIAEDYFMAKAIADRGWKFSMSTQV 256

  Fly   258 ALQNSGLCDIGSFQARLIRWAKLRVAMVPTTILLEPLSECMILGAIAAWSASVLFSWDPLVFYLV 322
            |:||||...|..||:|:|||.|||:.|:|.||:.||:|||.:...|..|:|..:|.||.:||::.
  Rat   257 AMQNSGSYSISQFQSRMIRWTKLRINMLPATIICEPISECFVASLIIGWAAHHVFRWDIMVFFMC 321

  Fly   323 HVLCWFLSDWLLLSIVQHGSMPFHKFEFVVGWLFRELTGPYLFLHALWNPAIRWRARTYKLHWGG 387
            |.|.||:.|::.|..||.|::.|.|.::.|.|..||....|:||.|||:|.|.|||..|:|..||
  Rat   322 HCLAWFIFDYIQLRGVQGGTLCFSKLDYAVAWFIRESMTIYIFLSALWDPTISWRAGRYRLRCGG 386

  Fly   388 VAYEL 392
            .|.|:
  Rat   387 TAEEI 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlcTNP_611636.1 BcsA 4..399 CDD:224136 204/392 (52%)
Glucosylceramide_synthase 52..281 CDD:133012 135/228 (59%)
UgcgNP_113983.1 Glucosylceramide_synthase 51..280 CDD:133012 135/228 (59%)
Glyco_tranf_2_3 51..276 CDD:290369 132/224 (59%)
(Q/R)XXRW. /evidence=ECO:0000305 272..276 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346283
Domainoid 1 1.000 208 1.000 Domainoid score I2768
eggNOG 1 0.900 - - E1_COG1171
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37763
Inparanoid 1 1.050 426 1.000 Inparanoid score I1693
OMA 1 1.010 - - QHG52929
OrthoDB 1 1.010 - - D344338at33208
OrthoFinder 1 1.000 - - FOG0004917
OrthoInspector 1 1.000 - - oto97404
orthoMCL 1 0.900 - - OOG6_104675
Panther 1 1.100 - - LDO PTHR12726
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4017
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

Return to query results.
Submit another query.