DRSC/TRiP Functional Genomics Resources

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Protein Alignment GlcT and Sdsl

DIOPT Version :9

Sequence 1:NP_611636.1 Gene:GlcT / 37516 FlyBaseID:FBgn0067102 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001101806.1 Gene:Sdsl / 360816 RGDID:1309192 Length:329 Species:Rattus norvegicus


Alignment Length:114 Identity:24/114 - (21%)
Similarity:43/114 - (37%) Gaps:25/114 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 LLRKAVIDQLGGLRAFGCY----LAEDFFI------ARSVTRLGWKMRISNQPALQNSGLCDIGS 269
            ||....:.|:.|:..|..|    :|..|.|      .:.:.:.|.:..:.:...  |:|:....|
  Rat    20 LLESWALSQVAGMPVFLKYENVQIAGSFKIRGIGHFCQQMAKRGCRHLVCSSGG--NAGIAAAYS 82

  Fly   270 FQARLIRWAKLRVAMVPTTILLEPLSECMILGAIAAWSASVLFS---WD 315
            .|       ||.   :|.||:|...:...::..:....|.|..:   ||
  Rat    83 AQ-------KLG---IPVTIVLPESTSKQVVRRLEGEGAEVQLTGKVWD 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlcTNP_611636.1 BcsA 4..399 CDD:224136 24/114 (21%)
Glucosylceramide_synthase 52..281 CDD:133012 15/75 (20%)
SdslNP_001101806.1 L-Ser-dehyd 17..326 CDD:107209 24/114 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1171
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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