DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GlcT and cgt-1

DIOPT Version :9

Sequence 1:NP_611636.1 Gene:GlcT / 37516 FlyBaseID:FBgn0067102 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_506971.2 Gene:cgt-1 / 188169 WormBaseID:WBGene00011517 Length:466 Species:Caenorhabditis elegans


Alignment Length:400 Identity:171/400 - (42%)
Similarity:246/400 - (61%) Gaps:20/400 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPLPLY-----------GFAAFFM---VFWLGTWMVHVIAICYGRYKLHKKSCKLPTEAQPLPGV 54
            :|..||           ||:...:   :|....::||:||..|..|:||.|....||    ||||
 Worm    49 MPATLYSGMNWLRDHLDGFSLLALSGCIFVSVLYLVHIIAFFYSIYRLHHKVEPDPT----LPGV 109

  Fly    55 SILKPLMGVDPNLQHNLETFFTMDYPLYELLFCVEDKEDPAIQLVERLLAKYPLVDAALFVGGSD 119
            |::||::|.|.||..|||:|||..|..:|||||...:||.||::|..|:.|:|.::|.:...|..
 Worm   110 SVIKPIVGTDKNLYQNLESFFTSQYHSFELLFCFHSEEDEAIEVVRSLIKKHPNIEAKILFEGEP 174

  Fly   120 VGVNPKINNIHPGYMAAKYDFVMISDSGIKMKDDTLLDMVQNM--SEKHALVHQMPFTCDRDGFA 182
            ||:|||:||:.|.|.||:|..|:||||.|.|:.|.:|||...|  .||.|.|.|:|:..||.||.
 Worm   175 VGMNPKVNNMMPAYRAARYPLVLISDSAIFMRPDGILDMATTMMSHEKMASVTQIPYCKDRQGFH 239

  Fly   183 ATFEKVFFGTVQSRIYLSADVLGINCHTGMSCLLRKAVIDQLGGLRAFGCYLAEDFFIARSVTRL 247
            |.||::||||..:|:||..:.||:.|.:|||.:::|:.:|:.||:..||.|||||:|.|:::|..
 Worm   240 AAFEQIFFGTSHARLYLVGNFLGVVCSSGMSSMMKKSALDECGGMEKFGEYLAEDYFFAKALTSR 304

  Fly   248 GWKMRISNQPALQNSGLCDIGSFQARLIRWAKLRVAMVPTTILLEPLSECMILGAIAAWSASVLF 312
            |.|..||..||||||....:.||..|:.||.|||:||:|..:::|||.:|:..|.|.|:..:.|.
 Worm   305 GCKAAISTHPALQNSASVTVLSFFNRIGRWIKLRIAMMPHLMVVEPLQDCVTSGLIMAFGLNYLG 369

  Fly   313 SWDPLVFYLVHVLCWFLSDWLLLSIVQHGSMPFHKFEFVVGWLFRELTGPYLFLHALWNPAIRWR 377
            .:.....:.:|:..|.:.|:.|::.:|:|...|..|.||..|||||.|.|::|:.|:..|.|.||
 Worm   370 GYSVYKTFGLHLFYWIVMDFSLMTSMQNGKFNFTPFLFVFIWLFREFTSPFIFIKAVLAPTIVWR 434

  Fly   378 ARTYKLHWGG 387
            ...:||.|||
 Worm   435 NNKFKLSWGG 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GlcTNP_611636.1 BcsA 4..399 CDD:224136 170/399 (43%)
Glucosylceramide_synthase 52..281 CDD:133012 112/230 (49%)
cgt-1NP_506971.2 HpnI 68..446 CDD:132512 165/380 (43%)
Glucosylceramide_synthase 107..338 CDD:133012 112/230 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162622
Domainoid 1 1.000 175 1.000 Domainoid score I2174
eggNOG 1 0.900 - - E1_COG1171
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37763
Inparanoid 1 1.050 356 1.000 Inparanoid score I1304
Isobase 1 0.950 - 0 Normalized mean entropy S3069
OMA 1 1.010 - - QHG52929
OrthoDB 1 1.010 - - D344338at33208
OrthoFinder 1 1.000 - - FOG0004917
OrthoInspector 1 1.000 - - otm14454
orthoMCL 1 0.900 - - OOG6_104675
Panther 1 1.100 - - O PTHR12726
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4017
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.760

Return to query results.
Submit another query.