DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11474 and Armt1

DIOPT Version :9

Sequence 1:NP_611634.1 Gene:CG11474 / 37514 FlyBaseID:FBgn0034688 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_077223.2 Gene:Armt1 / 73419 MGIID:1920669 Length:439 Species:Mus musculus


Alignment Length:436 Identity:158/436 - (36%)
Similarity:246/436 - (56%) Gaps:34/436 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LAALYKQSFAYYTFRVRLPSTLATIADSLVKDKDVLLATYGAAAEADIEQTTKEV---RQLRDDI 85
            |:|..:.||||.|.:.|.|..|..:.|:|.:.|......:|   |..||...|.:   .:||:::
Mouse     8 LSAKDEGSFAYLTIKDRTPQILTKVIDTLHRHKSEFFEKHG---EEGIEAEKKAISLLSKLRNEL 69

  Fly    86 LSNGPLLPFGENDSDSEVWNAFLE-------KLPKEKRTYFSVCWLYAECYMYRKISSIFRATAH 143
            .::.|:.|..:...|:.:||.:||       :...|.|.:||. ||:.||||||:|......:..
Mouse    70 QTDKPITPLVDKCVDTHIWNQYLEYQRSLLNEGDGEPRWFFSP-WLFVECYMYRRIHEAIMQSPP 133

  Fly   144 LAAYDYFSQQKQT---ATKLSVDAM------LAVAKATRHNERNSDTFRQLIKLNLWGNRCDLSI 199
            :..:|.|.:.|:.   .::.|:||:      |...|..| .|:..|.|.:|::::||||:||||:
Mouse   134 IHDFDVFKESKEENFFESQGSIDALCSHLLQLKPVKGLR-EEQIQDEFFKLLQISLWGNKCDLSL 197

  Fly   200 TSGKQVKPTGNAFDQVTDLEEKLLIDGTAEVWKALDGASGEGI------VDIIFDNAGYELYTDL 258
            :.|:......|..:.:.||:..:||:.|..:| ||.....:.:      |||:.||:|:||.|||
Mouse   198 SGGESSSQKANIINCLQDLKPFILINDTESLW-ALLSKLKKTVETPVVRVDIVLDNSGFELITDL 261

  Fly   259 ILAEYIIDKGLAAKVRFNPKAIPWFISDVMEHDFHWALQFLADHPDPVLSEVGKKWQRLTTEGKF 323
            :||:::....||.::.|:.|:||||:|||.||||:|.::.:.......:|..|..|:.....|::
Mouse   262 VLADFLFSSELATEIHFHGKSIPWFVSDVTEHDFNWIVEHMKSSNLESMSTCGACWEAYARMGRW 326

  Fly   324 ELSPLEH-FWTSPYEFYRMPEVNPSLYDRLKEAQLVIFKGDLNYRKLLGDFSWDSTESFETCLRG 387
            ...  :| |||.|:.:..||:|.|.||..|::|.|::||||||||||:||..|..|..|...|.|
Mouse   327 AYH--DHAFWTLPHPYCVMPQVAPDLYAELQKAHLILFKGDLNYRKLMGDRKWKFTFPFHQALSG 389

  Fly   388 FRPSNLCTLRTIKADLICGLGAGVADQLFAKDKEWMLTGEYGVIQF 433
            |.|:.||::||:|.:|..||..|.|:||.|.|..|:.||.||::||
Mouse   390 FHPAPLCSIRTLKCELQVGLQPGQAEQLTASDPHWLTTGRYGILQF 435

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG11474NP_611634.1 DUF89 36..415 CDD:280170 141/404 (35%)
Armt1NP_077223.2 DUF89 20..417 CDD:376673 141/404 (35%)