DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCND2 and Task6

DIOPT Version :10

Sequence 1:NP_036413.1 Gene:KCND2 / 3751 HGNCID:6238 Length:630 Species:Homo sapiens
Sequence 2:NP_650300.2 Gene:Task6 / 41671 FlyBaseID:FBgn0038165 Length:408 Species:Drosophila melanogaster


Alignment Length:404 Identity:81/404 - (20%)
Similarity:142/404 - (35%) Gaps:136/404 - (33%)


- Green bases have known domain annotations that are detailed below.


Human   124 LIPEIIGDCCYEEYKDRRRENAERLQDDADTDTAGESALPTMTARQRVWRAFENPHTSTMAL--- 185
            |:...:.|....|.:.||   .|.|||      |.:..:......|..::..|     |:.|   
  Fly    20 LVGAAVFDALESETEKRR---WEALQD------AEDMIIRKYNISQEDFKVME-----TVVLKSE 70

Human   186 ------------VFYYVTGFFIAVSVIANVVETVPCG-SSPGHIKELPCGERYAVAFFCLDTACV 237
                        .|||.|          .|:.|:..| |:|                   .|...
  Fly    71 SHKAGQQWKFTGAFYYAT----------TVLTTIGYGHSTP-------------------STVGG 106

Human   238 MIFTVEYLLRLAAAPSRYRFVRSVMSIIDVVAILPYYIGLVMTDNEDVSGAFVTLRVFRVFR-IF 301
            .:||:.|                        ||:...:||||..:       :..||.|:.. :.
  Fly   107 KLFTMCY------------------------AIVGIPLGLVMFQS-------IGERVNRLSSYVI 140

Human   302 KFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPAAFWYTIV 366
            |..|.|...:      ::.|||:..:....|::.:..|.......|....|.|.|:    :|..:
  Fly   141 KAVRSSLRCK------RTVASEVDLICVVTTLSSLTIAGGAAAFSKFEGWSYFDSV----YYCFI 195

Human   367 TMTTLGYGDMV-----------PKTIAGKIFGSICSLSGVLVIALPVPVIVSNFSRIYHQNQRAD 420
            |:||:|:||||           |:.:   :|..|..|.|:.::|..:.::|..|..:..:::|.|
  Fly   196 TLTTIGFGDMVALQRDNALNRKPEYV---MFALIFILFGLAIVAASLNLLVLRFVTMNTEDERRD 257

Human   421 KRRAQKKARLARIRAAKSGSANAYMQSKRNGLLSNQLQSSEDEQAFVSKSGSSFETQHHHLLHCL 485
            :.:|.:..::|........::|..:.|...|         .|.|:....:.||..:     .||:
  Fly   258 EAQAMQALQVAVKLEGDVITSNGSILSGYEG---------HDGQSLNGSNTSSMCS-----CHCI 308

Human   486 -------EKTTNHE 492
                   :|::|.|
  Fly   309 CLNGNRHKKSSNLE 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCND2NP_036413.1 Interaction with KCNIP1, KCNIP2, and other family members. /evidence=ECO:0000250|UniProtKB:Q63881 2..20
BTB_POZ 6..144 CDD:453885 5/19 (26%)
Interaction with KCNIP1. /evidence=ECO:0000250|UniProtKB:Q63881 71..90
Ion_trans 184..415 CDD:459842 52/258 (20%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 308..321 0/12 (0%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 370..375 2/4 (50%)
DUF3399 470..546 CDD:463381 7/30 (23%)
Important for normal channel activation and inactivation, for interaction with KCNIP2, and probably other family members as well. /evidence=ECO:0000250|UniProtKB:Q63881, ECO:0000305|PubMed:16934482 474..630 5/26 (19%)
Required for dendritic targeting. /evidence=ECO:0000250|UniProtKB:Q63881 474..489 3/21 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 600..630
PDZ-binding. /evidence=ECO:0000250|UniProtKB:Q63881 627..630
Task6NP_650300.2 Ion_trans_2 <78..132 CDD:462301 19/113 (17%)
Ion_trans_2 165..243 CDD:462301 21/84 (25%)
Blue background indicates that the domain is not in the aligned region.

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