DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9308 and p24beta2

DIOPT Version :9

Sequence 1:NP_611629.1 Gene:CG9308 / 37507 FlyBaseID:FBgn0034681 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_187425.1 Gene:p24beta2 / 819959 AraportID:AT3G07680 Length:208 Species:Arabidopsis thaliana


Alignment Length:208 Identity:57/208 - (27%)
Similarity:92/208 - (44%) Gaps:24/208 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IVLVLVL--FQAACGFIVTLDAHETMCFYDHANV-SDKVTVSFEVMEGG----FKDVGVE--IAG 60
            |||:.:|  |||..|....:|..|  ||...|.. .|.:.|||.|::..    |.:.||:  |.|
plant     7 IVLLGLLWSFQATLGIRFVIDREE--CFSHKAEYEGDTLHVSFVVIKSDSQWHFNEDGVDLVIHG 69

  Fly    61 PDDDRLHHSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTPKILMFQFHVARAIEFYMD---SSKR 122
            |..:::|..::.......|...|:|.|:.||.||    :|......|.|......|.|   ..:.
plant    70 PTGEQIHDFREQISAKHDFVVQKKGVYRFCFTNK----SPYHETIDFDVQLGHFAYYDQHAKDEH 130

  Fly   123 VDDVIEQATVQSMINQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVELRVLAWSIFGPMMLIITAV 187
            ...::||      |::|...|..::.||.::..:......|::.:..|.:..::|....||..:.
plant   131 FTPLMEQ------ISKLEEALYNIQFEQHWLEAQTDRQAIVNENMSKRAVHKALFESFALIGASF 189

  Fly   188 LEVYYLKHFFEVK 200
            |:||.|:..||.|
plant   190 LQVYLLRRLFERK 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9308NP_611629.1 EMP24_GP25L 17..198 CDD:279450 47/190 (25%)
p24beta2NP_187425.1 EMP24_GP25L 21..200 CDD:279450 47/190 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 81 1.000 Domainoid score I2948
eggNOG 1 0.900 - - E1_KOG1692
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 87 1.000 Inparanoid score I2316
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1328081at2759
OrthoFinder 1 1.000 - - FOG0000272
OrthoInspector 1 1.000 - - mtm1213
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22811
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.930

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