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Protein Alignment CG9308 and Tmed3

DIOPT Version :9

Sequence 1:	NP_611629.1	Gene:	CG9308 / 37507	FlyBaseID:	FBgn0034681	Length:	203	Species:	Drosophila melanogaster
Sequence 2:	NP_079636.2	Gene:	Tmed3 / 66111	MGIID:	1913361	Length:	221	Species:	Mus musculus

Alignment Length:	208	Identity:	52/208 - (25%)
Similarity:	90/208 - (43%)	Gaps:	19/208 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 VLVLVLFQA----ACGFIVTLDAHETMCFYDHANVSDKVTVSFEVMEGGFKDVGVEIAGPDDDRL 66
            :|:|:|.:|    :......|..:...||::......|.::.::|:.||..||...:..|..:.:
Mouse    17 LLLLLLLRAEPLRSAELTFELPDNAKQCFHEEVEQGVKFSLDYQVITGGHYDVDCYVEDPRGNVI 81

  Fly    67 HHSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTPKILMFQFHVARAIEFYMDSSKRVDDVIEQAT 131
            :...:....|||:....:|.|:.||.|:.||.:.|.:.|.|.|........|...||..:.:..:
Mouse    82 YRETKKQYDSFTYKTEAKGVYRFCFSNEFSTFSHKTVYFDFQVGDEPPILPDMGNRVTALTQMES 146

  Fly   132 VQSMINQLSAKLGAVK-MEQEYMHFRYRGHLEVSDM-----VELRVLAWSIFGPMMLIITAVLEV 190
            ....|::      |:| :.....|:|.|   |..|.     :..||..||:...:.|.:.:..:|
Mouse   147 ACVTIHE------ALKTVIDSQTHYRLR---EAQDRARAEDLNSRVSYWSVGETIALFVVSFSQV 202

  Fly   191 YYLKHFFEVKRVV 203
            ..||.||..||.|
Mouse   203 LLLKSFFTEKRPV 215

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.