DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9308 and tmed9

DIOPT Version :10

Sequence 1:NP_611629.1 Gene:CG9308 / 37507 FlyBaseID:FBgn0034681 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_001028280.2 Gene:tmed9 / 613145 ZFINID:ZDB-GENE-050417-434 Length:223 Species:Danio rerio


Alignment Length:228 Identity:49/228 - (21%)
Similarity:96/228 - (42%) Gaps:36/228 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LVLVLFQAACGFIVTLDAHETM--CFYDHANVSDKVTVSFEVME-----GGFK------------ 52
            :|.:..|....|:|.|:.:.::  ..|.|...::|.....|:.:     |.::            
Zfish     1 MVAIRMQFTLYFLVLLNIYNSLVSALYFHIGETEKKCFIEEIPDETMIIGNYRTQLYDKQKEEYL 65

  Fly    53 ------DVGVEIAGPDDDRLHHSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTPKILMFQFHVAR 111
                  .:.||:..||:..:...:..:.|.|.||:...|.:|:|..:..|    |..:|...:.|
Zfish    66 PATQGLGMFVEVKDPDEKVILSRQYGSEGRFIFTSHTPGEHQICLHSNSS----KFALFAGGMLR 126

  Fly   112 AIEFYMDSSKRVDDVIEQAT------VQSMINQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVELR 170
             :...:...:..::..|.|.      :|..:.||..::..::.||.|..:|.....:.|:....|
Zfish   127 -VHLDIQVGEHTNNYAEIAAKDKLTELQLRVRQLMEQVDQIQKEQNYQRYREERFRQTSESTNQR 190

  Fly   171 VLAWSIFGPMMLIITAVLEVYYLKHFFEVKRVV 203
            ||.|||...::|:.....::.:||.|||.|::|
Zfish   191 VLWWSIVQTLILVAIGFWQMRHLKSFFEAKKLV 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9308NP_611629.1 EMP24_GP25L 17..198 CDD:426051 43/211 (20%)
tmed9NP_001028280.2 None

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