DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9308 and TMED7

DIOPT Version :9

Sequence 1:NP_611629.1 Gene:CG9308 / 37507 FlyBaseID:FBgn0034681 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_861974.1 Gene:TMED7 / 51014 HGNCID:24253 Length:224 Species:Homo sapiens


Alignment Length:204 Identity:63/204 - (30%)
Similarity:96/204 - (47%) Gaps:12/204 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LSAIVLVLVLFQAACGFIVTLDAHETMCFYDHANVSDKVTVSFEVMEGGFKDVGVEIAGPDDDRL 66
            |.|::|::.....|......|..:...|||:......|.|:.|:|:.||..||...:..||...|
Human    21 LLALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGTKCTLEFQVITGGHYDVDCRLEDPDGKVL 85

  Fly    67 HHSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTPKILMFQFHVARAIEFYMDSSKRVDDVIEQAT 131
            :...:....||||||.|.|.|:.||.|:.||.|.|.:.|.|.|......: .|..||..:.:..:
Human    86 YKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHKTVYFDFQVGEDPPLF-PSENRVSALTQMES 149

  Fly   132 VQSMINQLSAKLGAVKMEQEYM-HFRYR---GHLEVSDMVELRVLAWSIFGPMMLIITAVLEVYY 192
            ....|::      |:|...:|. |||.|   |.....|: ..||..||:...::|::.::.:|:.
Human   150 ACVSIHE------ALKSVIDYQTHFRLREAQGRSRAEDL-NTRVAYWSVGEALILLVVSIGQVFL 207

  Fly   193 LKHFFEVKR 201
            ||.||..||
Human   208 LKSFFSDKR 216

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG9308NP_611629.1 EMP24_GP25L 17..198 CDD:279450 56/184 (30%)
TMED7NP_861974.1 EMP24_GP25L 36..213 CDD:307313 56/184 (30%)
COPI vesicle coat-binding. /evidence=ECO:0000255 211..224 4/6 (67%)