DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9308 and tmed9

DIOPT Version :10

Sequence 1:NP_611629.1 Gene:CG9308 / 37507 FlyBaseID:FBgn0034681 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_001011147.1 Gene:tmed9 / 496564 XenbaseID:XB-GENE-944838 Length:217 Species:Xenopus tropicalis


Alignment Length:224 Identity:55/224 - (24%)
Similarity:98/224 - (43%) Gaps:40/224 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VLVLFQAACGFIVTLDAH----ETMCFYDHANVSDKVTVSFEVMEGGFK---------------- 52
            ||:|..|..|...:|..|    |..||.:  .:.|:..|     .|.::                
 Frog     6 VLLLLAACFGPAFSLYFHIGETEKKCFIE--EIPDETMV-----VGNYRTQMFDKQREDYLPATP 63

  Fly    53 --DVGVEIAGPDDDRLHHSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTPKILMFQFHVARAIEF 115
              .:.||:..|||..:...:..:.|.||||:...|.:|:|    :.:.:.|..:|...:.| :..
 Frog    64 GLGMFVEVKDPDDKVILSRQYGSEGRFTFTSHTPGEHQIC----LHSNSTKFALFAGGMLR-VHL 123

  Fly   116 YMDSSKRVDDVIEQA------TVQSMINQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVELRVLAW 174
            .:...:..:|.::.|      |:|..:.||..::..::.||.|..:|.....:.|:....|||.|
 Frog   124 DIQVGEHANDYVDIAAKDKLNTLQLRVRQLIEQVEQIQKEQNYQRWREERFRQTSESTSQRVLWW 188

  Fly   175 SIFGPMMLIITAVLEVYYLKHFFEVKRVV 203
            ||...::|:...|.::.:||.|||.|::|
 Frog   189 SIAQTLILVTIGVWQMKHLKGFFEAKKLV 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9308NP_611629.1 EMP24_GP25L 17..198 CDD:426051 47/208 (23%)
tmed9NP_001011147.1 EMP24_GP25L 19..212 CDD:426051 46/204 (23%)

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