DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9308 and Ticam2

DIOPT Version :9

Sequence 1:NP_611629.1 Gene:CG9308 / 37507 FlyBaseID:FBgn0034681 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_001102360.1 Gene:Ticam2 / 364867 RGDID:1308258 Length:232 Species:Rattus norvegicus


Alignment Length:64 Identity:16/64 - (25%)
Similarity:28/64 - (43%) Gaps:13/64 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 DDVIEQATVQSMI-NQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVE-LRVLAWSIFGPMMLIIT 185
            ||..|...||::: |....:.|.|..|...      |.|.:.::.: :...||:|     |::|
  Rat    85 DDTNEALRVQNLLQNDFGIRPGIVFAEMPC------GRLHLQNLDDAVNGSAWTI-----LLLT 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9308NP_611629.1 EMP24_GP25L 17..198 CDD:279450 16/64 (25%)
Ticam2NP_001102360.1 TIR_2 <115..>169 CDD:419986 7/28 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344437
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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