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Protein Alignment CG9308 and Tmed9

DIOPT Version :10

Sequence 1:	NP_611629.1	Gene:	CG9308 / 37507	FlyBaseID:	FBgn0034681	Length:	203	Species:	Drosophila melanogaster
Sequence 2:	NP_001009703.1	Gene:	Tmed9 / 361207	RGDID:	1307627	Length:	235	Species:	Rattus norvegicus

Alignment Length:	220	Identity:	51/220 - (23%)
Similarity:	94/220 - (42%)	Gaps:	24/220 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 LSAIVLVLVLFQAACGFIVTLDAHETMCFYD------------HANVSDKVTVSFEVMEGGFKDV 54
            :.|.:|:|.|..........:...|..||.:            ...:.||....::....|. .:
  Rat    22 MRAFLLLLCLAARGGALYFHIGETEKKCFIEEIPDETMVIGNYRTQLYDKQREEYQPATPGL-GM 85

  Fly    55 GVEIAGPDDDRLHHSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTPKILMFQFHVARAIEFYMDS 119
            .||:..|:|..:...:..:.|.||||:...|.:|:|    :.:.:.|..:|...:.| :...:..
  Rat    86 FVEVKDPEDKVILARQYGSEGRFTFTSHTPGEHQIC----LHSNSTKFSLFAGGMLR-VHLDIQV 145

  Fly   120 SKRVDDVIEQAT------VQSMINQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVELRVLAWSIFG 178
            .:..:|..|.|.      :|..:.||..::..::.||.|..:|.....:.|:....|||.|||..
  Rat   146 GEHANDYAEIAAKDKLSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQRVLWWSILQ 210

  Fly   179 PMMLIITAVLEVYYLKHFFEVKRVV 203
            .::|:...|.::.:||.|||.|::|
  Rat   211 TLILVAIGVWQMRHLKSFFEAKKLV 235

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.