DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9308 and tmed2

DIOPT Version :10

Sequence 1:NP_611629.1 Gene:CG9308 / 37507 FlyBaseID:FBgn0034681 Length:203 Species:Drosophila melanogaster
Sequence 2:XP_021334783.1 Gene:tmed2 / 321550 ZFINID:ZDB-GENE-030131-269 Length:208 Species:Danio rerio


Alignment Length:208 Identity:83/208 - (39%)
Similarity:121/208 - (58%) Gaps:16/208 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IVLVLVLFQAACGFIVTLDAHETMCFYDHANVSDKVTVSFEVMEGGFKDVGVEIAGPDDDRLHHS 69
            |||:..|...|.|:.|::|||...|||:..|...|:::.|||.||||.|:.|:|.|||..:::..
Zfish     8 IVLLCALSYTASGYFVSIDAHAEECFYERVNSGTKMSLMFEVAEGGFLDIDVKITGPDGKQIYKG 72

  Fly    70 KQDTMGSFTFTAMKEGRYQLCFDNKMSTMTPKILMFQFHVARAIEFYMDSSKRVDDVIE------ 128
            .:::.|.::..|..:|.|:.||.|:||||||||:||...:..|       .|..|...|      
Zfish    73 DRESSGKYSVAAHMDGTYKFCFSNEMSTMTPKIVMFTIDIGEA-------PKGQDMETEGGGDSW 130

  Fly   129 ---QATVQSMINQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVELRVLAWSIFGPMMLIITAVLEV 190
               |..::.|||:|:..:.|||.|||||..|.|.|..::|....||:.||.|..::|:...:.::
Zfish   131 DAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSFFEALVLVAMTLGQI 195

  Fly   191 YYLKHFFEVKRVV 203
            ||||.||||:|||
Zfish   196 YYLKRFFEVRRVV 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9308NP_611629.1 EMP24_GP25L 17..198 CDD:426051 72/189 (38%)
tmed2XP_021334783.1 EMP24_GP25L 20..203 CDD:426051 72/189 (38%)

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