DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9308 and p24-2

DIOPT Version :9

Sequence 1:NP_611629.1 Gene:CG9308 / 37507 FlyBaseID:FBgn0034681 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_001189205.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster


Alignment Length:208 Identity:48/208 - (23%)
Similarity:85/208 - (40%) Gaps:22/208 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 AIVLVLVLFQAACGFIVTLDAHETMCFYDHANVSDKVTVSFEV-----MEGGF----KDVG--VE 57
            ::.|:|.:..:|||....:...|..||.:.......|.|:::|     ...||    ..:|  ||
  Fly     7 SLALILCVLHSACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVE 71

  Fly    58 IAGPDDDRLHHSKQDTMGSFTFTAMKEGRYQLC-FDNKMSTMTPKILMFQFHV---ARAIEFYMD 118
            :...||..:......:.|..:||:...|.:.:| |.|..:..:...|.....:   ..||::...
  Fly    72 VRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHAIDYAHV 136

  Fly   119 SSKRVDDVIEQAT-VQSMINQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVELRVLAWSIFGPMML 182
            :.|      |:.| :|..|.||..::..:..||.|..:|.......|:....|||.||:...::|
  Fly   137 AQK------EKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVL 195

  Fly   183 IITAVLEVYYLKH 195
            :......::.|.|
  Fly   196 VCMGFWHLFNLFH 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9308NP_611629.1 EMP24_GP25L 17..198 CDD:279450 44/195 (23%)
p24-2NP_001189205.1 EMP24_GP25L 20..206 CDD:279450 42/191 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454813
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22811
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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