DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9308 and tmed-10

DIOPT Version :10

Sequence 1:NP_611629.1 Gene:CG9308 / 37507 FlyBaseID:FBgn0034681 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_505879.1 Gene:tmed-10 / 179567 WormBaseID:WBGene00009829 Length:204 Species:Caenorhabditis elegans


Alignment Length:224 Identity:49/224 - (21%)
Similarity:89/224 - (39%) Gaps:50/224 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LSAIVLVLVLFQAACGFIVTLDAHETMCFYDHANVSDKVTVSFEVMEGGFKDVGVEIAGP---DD 63
            ||||||...|     .|.|  ...|..|..:..:.:..||..:|..:      |::..|.   .|
 Worm     8 LSAIVLAHSL-----RFYV--PPKEKKCLKEEIHKNVVVTGEYEFSQ------GIQYTGSIHVTD 59

  Fly    64 DRLH-----HSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTP----KILMFQFHVARAIEFYMDS 119
            .|.|     .:..|..|.|.|||.:...:::|.:|......|    ::.:...|...|       
 Worm    60 TRGHTLYKRENFADLKGKFAFTADEYDIFEICIENHPPAGHPGEKREVSLILKHGVEA------- 117

  Fly   120 SKRVDDV----------IEQATVQSMINQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVELRVLAW 174
             |..||:          :|...::.|.:.::.....::..:|.|.       ..::....|||..
 Worm   118 -KNYDDIAKAEKLKPLEVELRRLEDMADSITKDFAFMRQREEEMR-------NTNESTNSRVLYL 174

  Fly   175 SIFGPMMLIITAVLEVYYLKHFFEVKRVV 203
            |||..:.|:..|:.:|.:|:::|:.|:::
 Worm   175 SIFSMLCLLGLAIWQVLFLRNYFKSKKLI 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9308NP_611629.1 EMP24_GP25L 17..198 CDD:426051 40/202 (20%)
tmed-10NP_505879.1 EMP24_GP25L 16..198 CDD:426051 41/209 (20%)

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