Protein Alignment CG9308 and tmed-1

DIOPT Version :9

• Sequence 1: NP_611629.1
• Gene: CG9308 / 37507
• FlyBaseID: FBgn0034681
• Length: 203
• Species: Drosophila melanogaster
• Sequence 2: NP_502288.1
• Gene: tmed-1 / 178145
• WormBaseID: WBGene00010670
• Length: 234
• Species: Caenorhabditis elegans
• Alignment Length: 228
• Identity: 54/228 - (23%)
• Similarity: 98/228 - (42%)
• Gaps: 53/228 - (23%)

  Fly     6 VLVLVLFQAACG---FIVTLDAHETMCFYDHANVSDKVT--VSFEVMEGGFKDVGVEIAGPDDDR 65
            |::|:.....||   |.|.:.|.:..||:...:::...|  |.::|::||..::...|
 Worm    10 VILLITPFILCGEYDFTVEVPAGKFQCFFQPVDLAKHKTLEVDYQVIDGGDLNINFMI------- 67

  Fly    66 LHHS---KQDTM---GSFTFTAMKEGRYQLCFDNKMSTMTPKILMFQFHVARAIEFYMDSSKRVD 124
            ||.:   |||.:   ||......:.|.||:||||..|..:.|::.|:.       |..|:...:|
 Worm    68 LHGANILKQDQLKVDGSHRIELNQPGDYQVCFDNSFSYQSRKVVFFEI-------FLFDAHGNLD 125

  Fly   125 DVIEQATVQSMI---NQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVEL----------------- 169
                :|.:.:|.   :.||||:..:.:..:..|.|..|.....:.||.
 Worm   126 ----EADLSAMARTDSDLSAKMNELGVTIDEFHRRANGIKNNLNKVEYHQALLRAHEARDRAVMS 186

  Fly   170 ----RVLAWSIFGPMMLIITAVLEVYYLKHFFE 198
                ||..||:...::::..|.::|:.::..||
 Worm   187 ANFDRVTFWSVVHTLVMVGVAGVQVFMIRSLFE 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9308	NP_611629.1	EMP24_GP25L	17..198	CDD:279450	49/215 (23%)
tmed-1	NP_502288.1	EMP24_GP25L	24..219	CDD:366467	48/212 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000272
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1510
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910