DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gr58b and Gr8a

DIOPT Version :9

Sequence 1:NP_523808.2 Gene:Gr58b / 37502 FlyBaseID:FBgn0041238 Length:408 Species:Drosophila melanogaster
Sequence 2:NP_511097.3 Gene:Gr8a / 31865 FlyBaseID:FBgn0030108 Length:385 Species:Drosophila melanogaster


Alignment Length:381 Identity:71/381 - (18%)
Similarity:140/381 - (36%) Gaps:118/381 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 VLQWNFFVMLFLRAIAVVSCY--GTLWLKRHK-----------------IIQLYKYSL------- 116
            ::.|:.|:::.|.|: |::|.  |..:|.|..                 ::.:|..:|       
  Fly    39 LMAWSLFLLISLSAL-VLACLFSGEEFLYRGDMFGCANDALKYVFAELGVLAIYLETLSSQRHLA 102

  Fly   117 -IYWKRFGHITRAIVDKKELLDLQESLARIMIRKIILLYSAFLCSTVL-----QYQLL------- 168
             .:|..|    :....|..|:.|:....: ..|.:|.||:.......:     |:|.|       
  Fly   103 NFWWLHF----KLGGQKTGLVSLRSEFQQ-FCRYLIFLYAMMAAEVAIHLGLWQFQALTQHMLLF 162

  Fly   169 -SVINPQIFLAFCARLTHFLHFLCVKMGFFGVLVLLNHQF--LVIHLAINALHGRKARKKWKALR 230
             |...|.::|.:...|...||           |.||..|.  |...:.:.|.:.|.|.:..::..
  Fly   163 WSTYEPLVWLTYLRNLQFVLH-----------LELLREQLTGLEREMGLLAEYSRFASETGRSFP 216

  Fly   231 SVAAMHLKTL----RLARRIFDM---------FDIANATVFINMFMTAIN--ILYHAVQYSNSSI 280
            ...:...:.|    |:...::||         |.|....:.||: ..|::  .:|::: |:|  :
  Fly   217 GFESFLRRRLVQKQRIYSHVYDMLKCFQGAFNFSILAVLLTINI-RIAVDCYFMYYSI-YNN--V 277

  Fly   281 KSNGWGILFGNGLIVFNF-WGTMALM-------EMLDSVVT-----SCNNTGQQLRQLSDLPKVG 332
            .:|.:.::....|.:..| :.:.:.|       ..|.::||     ||                 
  Fly   278 INNDYYLIVPALLEIPAFIYASQSCMVVVPRIAHQLHNIVTDSGCCSC----------------- 325

  Fly   333 PKMQRELDVFTMQLRQNRLVYKICGIVELD-----KPACLSYIGSILSNVIILMQF 383
            |.:..::..|::||....:.....|:..||     :.||     |:.:.:|..:||
  Fly   326 PDLSLQIQNFSLQLLHQPIRIDCLGLTILDCSLLTRMAC-----SVGTYMIYSIQF 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gr58bNP_523808.2 7tm_7 12..385 CDD:285581 71/381 (19%)
Gr8aNP_511097.3 7tm_7 9..376 CDD:285581 69/379 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21143
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.