DRSC/TRiP Functional Genomics Resources

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Protein Alignment KCND1 and Ork1

DIOPT Version :10

Sequence 1:NP_004970.3 Gene:KCND1 / 3750 HGNCID:6237 Length:647 Species:Homo sapiens
Sequence 2:NP_001285097.1 Gene:Ork1 / 32020 FlyBaseID:FBgn0017561 Length:1019 Species:Drosophila melanogaster


Alignment Length:425 Identity:89/425 - (20%)
Similarity:143/425 - (33%) Gaps:121/425 - (28%)


- Green bases have known domain annotations that are detailed below.


Human   227 FPQAFFCMDTACVLIFTGEYLLRLFAAPSRCRFLRSVMSLIDVVAI---------LPYYIGLLVP 282
            |..|||...|.|..:..|......||.       |.:|....|:.|         |..|.|    
  Fly    92 FYHAFFFAFTVCSTVGYGNISPTTFAG-------RMIMIAYSVIGIPVNGILFAGLGEYFG---- 145

Human   283 KNDDVSGAFVTLRVFR-VFRIFKFSRHSQGLRILGYTLKSCASELGFLLFSLTMAIIIFATVMFY 346
                        |.|. ::|.:|..:.|..:..:       ..:||  |.:..:..:|....:|.
  Fly   146 ------------RTFEAIYRRYKKYKMSTDMHYV-------PPQLG--LITTVVIALIPGIALFL 189

Human   347 AEKGTNKTNFTSIP--AAFWYTIVTMTTLGYGDMVPSTIAG--KIFGSICSLSGVLVI-----AL 402
            .......|.|.:.|  .:.:|:.||.||:|:||.||:..|.  |.||....:..:.||     :|
  Fly   190 LLPSWVFTYFENWPYSISLYYSYVTTTTIGFGDYVPTFGANQPKEFGGWFVVYQIFVIVWFIFSL 254

Human   403 PVPVIVSNFSRIYHQNQRADKRRAQQKVRLARIRLAKSGTTNAFLQYKQNGGLEDSG-----SGE 462
            ...|::..|.           .|..|..:||.:....|....|......:|..:|.|     ..|
  Fly   255 GYLVMIMTFI-----------TRGLQSKKLAYLEQQLSSNLKATQNRIWSGVTKDVGYLRRMLNE 308

Human   463 EQALCV-----------RNRSAFEQQ---HHHLLHCLEKT-TCHEFTDELTFSEALGAVSPGGRT 512
            ...|.|           :|::..||:   ..::.:.|.:: :|.:.        ::..|.|....
  Fly   309 LYILKVKFCRKGNRKKPKNKAKTEQKKKSSRYIAYTLPRSNSCPDL--------SMYRVEPAPIP 365

Human   513 SRSTSVSSQPVGPGSLLSSCCPRRAKRRAIRL--ANSTASVSRGSMQELDMLAGLRRSHAPQSRS 575
            ||..:           .|.|....|.:|...:  |||...:|:     ||.......:.|.:..:
  Fly   366 SRKRA-----------FSVCADMVAAQREAGMVHANSDTELSK-----LDREKTFETAEAYRQTT 414

Human   576 SLNAKPHDSLDLNCDSRDFVAAIISIPTPPANTPD 610
            .|.||             .|.|:.::..|||...|
  Fly   415 DLLAK-------------VVNALATVKPPPAEQED 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KCND1NP_004970.3 Interaction with KCNIP1, KCNIP2, and other family members. /evidence=ECO:0000250|UniProtKB:Q63881 2..20
BTB_POZ 6..143 CDD:453885
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..163
Ion_trans 185..417 CDD:459842 48/208 (23%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 310..323 0/12 (0%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 372..377 2/4 (50%)
DUF3399 470..550 CDD:463381 16/85 (19%)
Required for dendritic targeting. /evidence=ECO:0000250|UniProtKB:Q63881 474..489 3/18 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 506..531 4/24 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 601..634 4/10 (40%)
Ork1NP_001285097.1 Ion_trans_2 83..144 CDD:462301 14/58 (24%)
Ion_trans_2 185..266 CDD:462301 23/91 (25%)
Blue background indicates that the domain is not in the aligned region.

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