DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk9 and Asic5

DIOPT Version :9

Sequence 1:NP_611622.2 Gene:ppk9 / 37498 FlyBaseID:FBgn0085398 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_071563.1 Gene:Asic5 / 63866 RGDID:69295 Length:495 Species:Rattus norvegicus


Alignment Length:585 Identity:117/585 - (20%)
Similarity:201/585 - (34%) Gaps:201/585 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 GPAR-----SIRSF--RRPPLWQPPPQDHAQDGQEMEVLDRQKRKDCRPACLVKGQAFIIEFLQG 157
            |||.     .||.:  :||   .|.|            .||:|              |..:|...
  Rat     9 GPAEKGLLGKIRRYLSKRP---LPSP------------TDRKK--------------FDHDFAIS 44

  Fly   158 SSIHGFIYLAKLGLSFVERVLWLAFICVALFSIISLSKRTWHRFQTSPMVISMDRNKLVWNTS-- 220
            :|.||...:|: ..:.|.:|:||:.:      :.|:|...|..:  |.:|     |..:|.|:  
  Rat    45 TSFHGIHNIAQ-NQNKVRKVIWLSVV------LGSVSLLVWQIY--SRLV-----NYFMWPTTTS 95

  Fly   221 ----------FPSLTVCPHKRIDELKVEEYILAHPDQFLSEEDQEDFRDFIVKLASLTYDN---- 271
                      ||::|.|...|.....|..:.:..   ||     .|....:::|..::.:|    
  Rat    96 IEVQYVEKIEFPAVTFCNLNRFQTEAVSRFGIIF---FL-----WDIVSKVLRLQEISGNNTGSP 152

  Fly   272 --LETLPLNKSYGIPSTKYLE----------LLY-----------ELKWAFEPEISSGAAVKMFI 313
              |:.:..::::.|  |::::          |::           :.|..|              
  Rat   153 EALDFVASHRNFSI--TEFVKNNGFYLNHDTLVHCEFFGKTCDPKDFKHVF-------------- 201

  Fly   314 YETQTEFGICHSVN--SMVARYNSFDYWRSGDWSLMD-HGDRVTVHPLDGEIYAQIINL--STAY 373
                ||:|.|.:.|  ..|...|.......|...|:| |.:..|.:|:.|...|.:|.:  |...
  Rat   202 ----TEYGNCFTFNYGENVQSKNKVSVSGRGLKLLLDVHQEEFTDNPVPGFADAGVIFVIHSPKK 262

  Fly   374 DVYFHGAGDVPSISKQRYTFPESDYTTVELIALEIFTNEEARATKQRSCRFNYEAEEMMTVPIYS 438
            :..|.|.|         .:.|...:..|.:..|:....|....    .|..:.:.....|...|.
  Rat   263 EPQFDGLG---------LSSPVGMHARVTIRQLKTIHQEYPWG----ECNPDIKLRNFTTYSTYG 314

  Fly   439 FGLCLSECRMFFALRVCGCVPHFYRNRCGYNHIFGTQMRNGRRLPVCGLEGIGC-LVK------- 495
               ||.||:.....|:|||:|..                    ||..|:|   | |:|       
  Rat   315 ---CLKECKAKHIQRLCGCLPFL--------------------LPGNGVE---CDLLKYYNCVSP 353

  Fly   496 ----IKREIISLKSDKYKINCNCLANCDD-----------------SNFFVQSYRSRVWFLGANL 539
                |:|:.:......   |.:|...|::                 :.|..:.......::..||
  Rat   354 ILDHIERKGLCTMGTH---NSSCPVPCEETEYPATIAYSTFPSQRATKFLAKKLNQSQEYIRENL 415

  Fly   540 -----QWGILEHPKMQLRREVLFSFADVLVYIGGLVGFFLGCSALSFTEII-YYFTARFVRRMFF 598
                 .:..|.:...|.::.|  |..::|..:||.:|.|.|.|.::..||| |.||:.:...:||
  Rat   416 VNIEINYSDLNYKITQQQKAV--SVPELLADVGGQLGLFCGASLITIIEIIEYLFTSFYWVFIFF 478

  Fly   599  598
              Rat   479  478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk9NP_611622.2 ASC 154..587 CDD:279230 99/511 (19%)
Asic5NP_071563.1 deg-1 40..465 CDD:273309 98/510 (19%)
ASC 41..466 CDD:279230 99/510 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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