DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk9 and del-4

DIOPT Version :9

Sequence 1:NP_611622.2 Gene:ppk9 / 37498 FlyBaseID:FBgn0085398 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:542 Identity:108/542 - (19%)
Similarity:175/542 - (32%) Gaps:179/542 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 EFLQGSSIHGFIYLAKLGLSFVERVLWLAFICVALFSIISLSKRTWHRFQTSPMVISMDRNKLVW 217
            :|...:|.||..::......:: |..|:      |..::|::...|       ..|::..|.|.:
 Worm    14 DFSCWTSTHGVPHIGMANARWL-RAFWI------LVVVVSIALFIW-------QFITLLTNYLSF 64

  Fly   218 --NT---------SFPSLTVC---PHKRIDELKVEEYILAHPDQFLSEEDQEDFRDFIVKLASLT 268
              ||         :||::|:|   |.|..:...|:..:.|..|.:.|:.....|.    ..||||
 Worm    65 SVNTETTLQFAERTFPTVTICHLNPWKLSETKSVDPDMSALIDAYNSDSSSAQFG----LPASLT 125

  Fly   269 YDNLE-----TLPLNKSYGIPSTKYLELLYELKW--AFEPEISSGAAVKMFIYETQT-------- 318
            .|..:     ||           .|.|.|.|.::  |.:...|....|....|..:|        
 Worm   126 ADRQQQASKWTL-----------MYSERLNEKQYNDAADIAYSYDDMVVSCTYNAKTCNITDFND 179

  Fly   319 ----EFGICHSVNS----------------MVARYNSFDY--WRSGDWSLMDHGDRVTVHPLDGE 361
                .:|.|...|:                ||.|.:...|  |......::|      :|..|..
 Worm   180 FYNPSYGNCLQFNTDGMYSSSRAGPLYGLRMVMRTDQDTYLPWTEASGVIID------IHMQDEI 238

  Fly   362 IYAQIINLSTAYDVYFHGAGDVPS-----ISKQRYTFPESDYTTVELIALEIFTNEEARATKQRS 421
            .|..:..       ||...|...|     :...|.:.|....||               .||.::
 Worm   239 PYPDVFG-------YFAPPGTASSLGVSYVQTTRLSKPYGSCTT---------------KTKLKT 281

  Fly   422 CRFNYEAEEMMTVPIYSFGLCLSECRMFFALRVCGCVPHFYRNRCGYNHIFGT----QMRNGRRL 482
            ..:         ...|:...|...|.....:..|||   :|.   .|:|...|    ...||   
 Worm   282 THY---------TGTYTVEACFRSCMQEKIIASCGC---YYP---AYSHASNTTQYVSCDNG--- 328

  Fly   483 PVCGLEGIGCLVKIKREIISLKSDKYKI--NCNCLANCDDSNFFV---------QSY-------- 528
             |..|..:.|:..|.    |..|.::.:  :|:|...|:..::.|         .||        
 Worm   329 -VQTLSNLNCVDLIN----SADSTEFDVLTDCDCPQPCEIDSYGVTVSTAQWPSDSYVPTECNPG 388

  Fly   529 -RSRVWFLGAN--LQWG-----ILEHPKMQLRREVL-----FSFADVLVYIGGLVGFFLGCSALS 580
             .|..|.....  |.|.     ::|....::..:||     ::|.:.:..:||.||.|||.|.:|
 Worm   389 GPSGPWDASGESCLDWYKANTILIEIYYERMNFQVLTESPAYTFVNFISDVGGQVGLFLGMSIIS 453

  Fly   581 FTE-------IIYYFTARFVRR 595
            ..|       :.:|......||
 Worm   454 AIEYLVLIFLVFFYCCTHKSRR 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk9NP_611622.2 ASC 154..587 CDD:279230 105/531 (20%)
del-4NP_492230.2 ASC 8..466 CDD:295594 105/531 (20%)
deg-1 14..460 CDD:273309 105/525 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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