DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk9 and del-7

DIOPT Version :9

Sequence 1:NP_611622.2 Gene:ppk9 / 37498 FlyBaseID:FBgn0085398 Length:599 Species:Drosophila melanogaster
Sequence 2:NP_501276.4 Gene:del-7 / 183498 WormBaseID:WBGene00016699 Length:614 Species:Caenorhabditis elegans


Alignment Length:573 Identity:108/573 - (18%)
Similarity:188/573 - (32%) Gaps:175/573 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 NQPGPARSIRSFRRPPLWQPPPQDH----------AQDGQEMEVLD-RQKRKDCRPACLVKGQAF 150
            :|....|...:.|...:.:|||::.          ....|..|.|. .|...:|:          
 Worm     7 HQTDRERVTHAARNMYIMKPPPENEVFISPITLASVNTTQYEEALKIAQFHCNCK---------- 61

  Fly   151 IIEFLQGSSIHGFIYLAKLGLSFVERVLW-LAFICVALFSI---ISLSKRTWHRFQTSPMVISMD 211
               :|....:|| :....:..|.:.:|.| :..:..|.:||   ||:.|:......|:.:.|...
 Worm    62 ---YLWLRELHG-LSAFMMSNSLMSKVFWAIVIMACAGWSIGNTISILKQYGDEATTTLLTILPT 122

  Fly   212 RNKLVWNTSFPSLTVCPHKRIDELKVEEYILAHPDQFLSE----ED-------QEDFRDFIVKLA 265
            :     ...||::..||.              :|| ||:.    ||       .|:..:|.:...
 Worm   123 K-----QLKFPTMIFCPR--------------NPD-FLNYYNVLEDMYNHLGYMENTTNFHILQY 167

  Fly   266 SLT---YDNLETLPLNKSYGIPSTKYLELLYELKWAFEPEISSGAAVKMFIY------ETQTE-F 320
            ::|   :||......|::|    .:.:.:.| |||..|     ....:||.:      .|.|: |
 Worm   168 AMTGFGFDNANGDTFNETY----REQIHIYY-LKWRGE-----RTQYEMFDFMFNKNGYTCTDLF 222

  Fly   321 GICHSVNSMVARYNSFDYW-------RSGDWSLMD---HGDRVTVHPLD---GEIYAQIINLSTA 372
            ..|:..:.   .||..|.:       |...:.|:|   ..|...|..|.   ..:.:.|:|....
 Worm   223 QTCYGGSQ---TYNCCDIFQPTYAMLRGRCFRLIDSYYQNDTDEVAKLSIFFNNMTSPILNTGVL 284

  Fly   373 YD-VYFHGAGDVPSISKQRYTFPESDYTTVELIALEIFTNEEARATKQRSCRFNYEAEEMMTVPI 436
            .. |.::|..:|......||....:|:..|...              |:|.....:::...|.||
 Worm   285 PQLVLYNGDSNVEIGIYPRYYLNSNDWNRVRFY--------------QKSMILLPKSDGCSTDPI 335

  Fly   437 YSFGL-CLSECRMFFALRVCGCVPHFYRNRCGYNHIFGTQMRNGRRLPVCGLEGIGCLVKIKREI 500
            |.... |.....:...:....|...:|:....|.          :.:|:|..:    ::....|.
 Worm   336 YQGKFTCFVYKWLMQLIEQYNCTVPYYKYTLSYL----------KDVPICEPD----VIVNNFEN 386

  Fly   501 ISLKSDK--YKINCNC--------LANCDDSNFFVQSYRSRVWFLGANLQWGILEHPKMQLRREV 555
            |||....  ||....|        ||...|::                      ..|....|.|.
 Worm   387 ISLTPSTIGYKCTSACSRIENTVTLATSIDTD----------------------PDPSYMFRIEA 429

  Fly   556 LFSFADVLVY--------------IGGLVGFFLGCSALSFTEIIYYFTARFVR 594
            .|::.:...|              :||..|.|:|.|.:||.::   |.:.|::
 Worm   430 SFTYLEYEQYKEIRTTSTAGFISELGGQAGLFVGSSVMSFVQL---FNSVFIQ 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk9NP_611622.2 ASC 154..587 CDD:279230 95/496 (19%)
del-7NP_501276.4 ASC <434..473 CDD:295594 9/41 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162375
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.