DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpN58A and ppp4cb

DIOPT Version :9

Sequence 1:NP_477384.1 Gene:PpN58A / 37493 FlyBaseID:FBgn0025573 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001104638.1 Gene:ppp4cb / 562705 ZFINID:ZDB-GENE-080219-32 Length:307 Species:Danio rerio


Alignment Length:299 Identity:126/299 - (42%)
Similarity:188/299 - (62%) Gaps:14/299 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 NLDQIIAKLK---LIGEIGSVVQISVREIEAVCSRAREVLLKQPTLLEIPAPINLLGDIHGQYLN 84
            :||:.|.:|:   ||.|         .|::|:|::|||:|:::..:..:.:|:.:.||||||:.:
Zfish     6 DLDRQIDQLRRCELIKE---------NEVKALCAKAREILVEESNVQRVDSPVTVCGDIHGQFYD 61

  Fly    85 LLRYFESNGYPPDSVYLLLGDYVDRGKQSIETLTLLLALKARYPTKFYLLRGNHECSSINHFYGF 149
            |...|...|..|::.||.:||:||||..|:||..||||||.|||.:..|:|||||...|...|||
Zfish    62 LKELFRVGGDVPETNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGF 126

  Fly   150 YDECKRRY-TVKLWRTFVDCYNCLPLAAIIEENIFCCHGGLSPHLFSMQQIREIRRPIEIPESGL 213
            ||||.|:| :|.:||...:.::.|.|:|||:..|||.||||||.:.::.|||.|.|..|:|..|.
Zfish   127 YDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGP 191

  Fly   214 ICDILWSDPDLRIMGWGPNERGVSHTFGSDVVSAFLHRFKLNLICRGHQVVEDGYEFFAKRQLIT 278
            :||:|||||: ...|||.:.||..:.||||||:.|.....:::|||.||:|.:||::.....::|
Zfish   192 MCDLLWSDPE-DTTGWGVSPRGAGYLFGSDVVAQFNAANDIDMICRAHQLVMEGYKWHFNETVLT 255

  Fly   279 IFSAPNYCGEFDNAGAMMCINQDLLCTFRVQRPILSEQR 317
            ::||||||....|..|::.:::.|...|.:......|.|
Zfish   256 VWSAPNYCYRCGNVAAILELDEHLQKEFIIFEAAPQETR 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpN58ANP_477384.1 PTZ00480 22..311 CDD:185658 124/291 (43%)
MPP_superfamily 23..311 CDD:301300 124/291 (43%)
ppp4cbNP_001104638.1 MPP_PP2A_PP4_PP6 6..290 CDD:277360 124/293 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0639
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.