DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpN58A and ppp1cb

DIOPT Version :9

Sequence 1:NP_477384.1 Gene:PpN58A / 37493 FlyBaseID:FBgn0025573 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001011467.1 Gene:ppp1cb / 496958 XenbaseID:XB-GENE-961670 Length:327 Species:Xenopus tropicalis


Alignment Length:304 Identity:187/304 - (61%)
Similarity:244/304 - (80%) Gaps:10/304 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DEGINLDQIIAKLKLIGEI-----GSVVQISVREIEAVCSRAREVLLKQPTLLEIPAPINLLGDI 78
            |..:|:|.:|::|.   |:     |.:||::..|:..:|.::||:.|.||.|||:.||:.:.|||
 Frog     3 DGELNVDSLISRLL---EVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDI 64

  Fly    79 HGQYLNLLRYFESNGYPPDSVYLLLGDYVDRGKQSIETLTLLLALKARYPTKFYLLRGNHECSSI 143
            ||||.:|||.||..|:||::.||.|||||||||||:||:.||||.|.:||..|:||||||||:||
 Frog    65 HGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASI 129

  Fly   144 NHFYGFYDECKRRYTVKLWRTFVDCYNCLPLAAIIEENIFCCHGGLSPHLFSMQQIREIRRPIEI 208
            |..||||||||||:.:|||:||.||:||||:|||::|.||||||||||.|.||:|||.|.||.::
 Frog   130 NRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDV 194

  Fly   209 PESGLICDILWSDPDLRIMGWGPNERGVSHTFGSDVVSAFLHRFKLNLICRGHQVVEDGYEFFAK 273
            |::||:||:||||||..:.|||.|:||||.|||:||||.||:|..|:||||.|||||||||||||
 Frog   195 PDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAK 259

  Fly   274 RQLITIFSAPNYCGEFDNAGAMMCINQDLLCTFRVQRPILSEQR 317
            |||:|:||||||||||||||.||.:::.|:|:|::.:|  ||::
 Frog   260 RQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKP--SEKK 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpN58ANP_477384.1 PTZ00480 22..311 CDD:185658 183/293 (62%)
MPP_superfamily 23..311 CDD:301300 183/292 (63%)
ppp1cbNP_001011467.1 MPP_PP1_PPKL 7..297 CDD:277359 183/292 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..327
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 1 1.010 - - D327461at33208
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.930

Return to query results.
Submit another query.