DRSC/TRiP Functional Genomics Resources

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Protein Alignment PpN58A and pef-1

DIOPT Version :9

Sequence 1:NP_477384.1 Gene:PpN58A / 37493 FlyBaseID:FBgn0025573 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_741091.1 Gene:pef-1 / 175257 WormBaseID:WBGene00003969 Length:707 Species:Caenorhabditis elegans


Alignment Length:333 Identity:104/333 - (31%)
Similarity:158/333 - (47%) Gaps:47/333 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MKKLLSNGS---------NKNKTLKFDEGINLDQ-IIAKLKLIGEIGSVVQISVREIEAVCSRAR 56
            :||:|.:.|         .|..||    .:.||: .:||:....::..|  :..:.:..:...||
 Worm   173 VKKMLEDTSPTNVDIDRNYKGPTL----SLPLDKPQVAKMIEAFKVNKV--LHPKYVLMILHEAR 231

  Fly    57 EVLLKQPTLLEIPAPIN----LLGDIHGQYLNLLRYFESNGYPP-DSVYLLLGDYVDRGKQSIET 116
            ::....|::..|...|:    :.||:||::.:|......||||. |:.|:..||:||||.||||.
 Worm   232 KIFKAMPSVSRISTSISNQVTICGDLHGKFDDLCIILYKNGYPSVDNPYIFNGDFVDRGGQSIEV 296

  Fly   117 LTLLLALKARYPTKFYLLRGNHECSSINHFYGFYDECKRRY---TVKLWRTFVDCYNCLPLAAII 178
            |.:|.||....|...||.|||||...:|..|||..|...:|   :..:.|...|.::.||:|.||
 Worm   297 LCVLFALVIVDPMSIYLNRGNHEDHIMNLRYGFIKELSTKYKDLSTPITRLLEDVFSWLPIATII 361

  Fly   179 EENIFCCHGGLSPHL-------FSMQQIREIRRP--------------IEIPESGLICDILWSDP 222
            :.:||..|||:|...       ....:.:.:.||              :.:.|...:.||:||||
 Worm   362 DRDIFVVHGGISDQTEVSKLDKIPRHRFQSVLRPPVNKGMESEKENSAVNVDEWKQMLDIMWSDP 426

  Fly   223 DLRIMGWGPNE-RGVSHTFGSDVVSAFLHRFKLNLICRGHQVVEDGYEFFAKRQLITIFSAPNYC 286
            ......| ||. ||....||:|:.::||.:....|:.|.|:...:||||......:|:|||.||.
 Worm   427 KQNKGCW-PNVFRGGGSYFGADITASFLEKHGFRLLVRSHECKFEGYEFSHNNTCLTVFSASNYY 490

  Fly   287 GEFDNAGA 294
            ....|.||
 Worm   491 ETGSNRGA 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpN58ANP_477384.1 PTZ00480 22..311 CDD:185658 97/304 (32%)
MPP_superfamily 23..311 CDD:301300 97/303 (32%)
pef-1NP_741091.1 MPP_RdgC 199..515 CDD:277364 97/303 (32%)
PP2Ac 218..514 CDD:197547 92/282 (33%)
EFh 634..699 CDD:238008
EF-hand_7 634..698 CDD:290234
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000018
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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