DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PpN58A and ppp3cb

DIOPT Version :9

Sequence 1:NP_477384.1 Gene:PpN58A / 37493 FlyBaseID:FBgn0025573 Length:324 Species:Drosophila melanogaster
Sequence 2:XP_012813808.1 Gene:ppp3cb / 100037840 XenbaseID:XB-GENE-949827 Length:531 Species:Xenopus tropicalis


Alignment Length:314 Identity:113/314 - (35%)
Similarity:170/314 - (54%) Gaps:42/314 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 MKKLLSNGSNKNKTLKFDEGINLDQIIAKLKLIGEIGSVVQISVREIEAVCSRARE---VLLKQP 63
            |.::...|..:.:|||       :.:|.:.:|             |.||.....||   :|.::.
 Frog    54 MNEVFVEGRPQLETLK-------NHLIKEGRL-------------EEEAALRIIREGAAILRQEK 98

  Fly    64 TLLEIPAPINLLGDIHGQYLNLLRYFESNGYPPDSVYLLLGDYVDRGKQSIETLTLLLALKARYP 128
            |:||:.|||.:.||||||:.:|::.||..|.|.::.||.||||||||..|||.:..|.:||..:|
 Frog    99 TMLEVEAPITVCGDIHGQFFDLMKLFEVGGTPHNTRYLFLGDYVDRGYFSIECVLYLWSLKIIHP 163

  Fly   129 TKFYLLRGNHECSSINHFYGFYDECKRRYTVKLWRTFVDCYNCLPLAAIIEENIFCCHGGLSPHL 193
            ...:||||||||..:..::.|..|||.:|:.:::.:.:|.::||||||::.:...|.||||||.:
 Frog   164 KTLFLLRGNHECRHLTEYFTFKQECKIKYSERVYDSCMDAFDCLPLAALLNQQFLCVHGGLSPEI 228

  Fly   194 FSMQQIREIRRPIEIPESGLICDILWSDPDLRIMGWGPNE----------RGVSHTFGSDVVSAF 248
            ..:..||::.|..|.|..|.:||:|||||   ...:|..:          ||.|:.:....|..|
 Frog   229 TCLDDIRKLDRFKEPPAFGPMCDLLWSDP---AEDYGSEKTLEHFTHNTVRGCSYFYSYPAVCEF 290

  Fly   249 LHRFKLNLICRGHQVVEDGYEFFAKRQ------LITIFSAPNYCGEFDNAGAMM 296
            |....|..:.|.|:..:.||..:.|.|      ||||||||||...::|..|::
 Frog   291 LQSNNLLSVIRAHEAQDAGYRMYRKSQTTGFPSLITIFSAPNYLDVYNNKAAVL 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PpN58ANP_477384.1 PTZ00480 22..311 CDD:185658 108/294 (37%)
MPP_superfamily 23..311 CDD:301300 108/293 (37%)
ppp3cbXP_012813808.1 MPP_PP2B 63..367 CDD:277361 111/305 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53795
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.