DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9294 and LOC548809

DIOPT Version :9

Sequence 1:NP_995920.1 Gene:CG9294 / 37491 FlyBaseID:FBgn0034666 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_001016055.2 Gene:LOC548809 / 548809 -ID:- Length:334 Species:Xenopus tropicalis


Alignment Length:326 Identity:92/326 - (28%)
Similarity:145/326 - (44%) Gaps:74/326 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 PVVATTSTTTRRT-----------TTTSSTTSRTTTSRTTVANFPIERDCVTCRCGLINTLYKIV 102
            ||..|.:.|...|           .:.|.|.|:.||:...:...|           |:::  :||
 Frog     8 PVSLTAAHTVAETMEFAGIILLLLVSASPTVSQNTTASPRICGSP-----------LVSS--RIV 59

  Fly   103 GGQETRVHQYPWMAVILIYNRFYCSGSLINDLYVLTAAHCVEGVPPELITLRFLEHNRSHSNDDI 167
            ||.:.....:||...:.......|.||:|::.:::|||||             .|::|:.|:..:
 Frog    60 GGTDATNGAWPWQISLRYKGSHICGGSVISNQWIMTAAHC-------------FEYSRTPSDYQV 111

  Fly   168 VIQRY-------------VSRVKVHELYNPRSFDNDLAVLRLNQPLDMRHHRLRPICLPVQSYSF 219
            ::..|             |:||.|:..:.......|:|:|:|..|:....:.| |:|:|..:..|
 Frog   112 LLGAYQLSVASASELLSSVARVIVNPSFTIPGGPGDIALLKLTSPVAYTEYIL-PVCVPSSASGF 175

  Fly   220 DHELGI-VAGWGAQREGGFGT-------DTLREVDVVVLPQSEC------RNGTTYRPGQITDNM 270
            ...:.. |.||     |..|:       .||::|...::..|.|      ::|.:.....:..:.
 Frog   176 YEGMQCWVTGW-----GNIGSAVTLPYPQTLQQVMTPLISWSTCNQMYHVQSGISSNIAIVPKDQ 235

  Fly   271 MCAGYISEGGKDACSGDSGGPLQTTFDEQPGQYQLAGIVSWGVGCARPQSPGVYTRVNQYLRWLG 335
            :|||| :.|.||:|.|||||||....  |...||: ||||||.|||:...|||||.|..:..||.
 Frog   236 ICAGY-AAGQKDSCQGDSGGPLVCQL--QGVWYQI-GIVSWGDGCAQASRPGVYTLVPNFKSWLS 296

  Fly   336 S 336
            |
 Frog   297 S 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9294NP_995920.1 Tryp_SPc 100..333 CDD:214473 77/259 (30%)
Tryp_SPc 101..334 CDD:238113 77/259 (30%)
LOC548809NP_001016055.2 Tryp_SPc 57..294 CDD:214473 77/259 (30%)
Tryp_SPc 58..297 CDD:238113 79/261 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 183 1.000 Inparanoid score I3837
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D380103at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.970

Return to query results.
Submit another query.