DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9294 and grass

DIOPT Version :10

Sequence 1:NP_995920.1 Gene:CG9294 / 37491 FlyBaseID:FBgn0034666 Length:352 Species:Drosophila melanogaster
Sequence 2:NP_651543.1 Gene:grass / 43273 FlyBaseID:FBgn0039494 Length:377 Species:Drosophila melanogaster


Alignment Length:286 Identity:95/286 - (33%)
Similarity:145/286 - (50%) Gaps:71/286 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 CGLINTL-YKIVGGQETRVHQYPWMAVILIY-----NRFYCSGSLINDLYVLTAAHCVEGVPPEL 150
            ||  |.| .::..|.|.::...|||| :|.|     :||.|.|::|::.|:|||||||.|:..:|
  Fly   111 CG--NFLSQRVSNGYEVKLSSRPWMA-LLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDL 172

  Fly   151 ITLRFLEHNRSHSND---------------DIVIQRYVSRVKVHELYNPRSFDNDLAVLRLNQPL 200
            ..:|..||..|...|               ::.|::::    :||.|:.|...:|:|:|:||:.:
  Fly   173 YEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHL----IHEKYDARHIMHDIALLKLNRSV 233

  Fly   201 DMRHHRLRPICLP-----------VQSYSFDHELGIVAGWGAQREGGFGTDTLREVDVVVLPQSE 254
            ..:.| ::|||||           :.:|       .|.|||. .|.|..:|.|.:.:|.:.|:|.
  Fly   234 PFQKH-IKPICLPITDELKEKAEQISTY-------FVTGWGT-TENGSSSDVLLQANVPLQPRSA 289

  Fly   255 CRNGTTYRPGQITDNMMCAGYISEGG--KDACSGDSGGPLQTTFDEQPGQY--QLA------GIV 309
            |  ...||.. :..:.:|.|    ||  :|:|.||||||||.     |.||  :.|      |||
  Fly   290 C--SQAYRRA-VPLSQLCVG----GGDLQDSCKGDSGGPLQA-----PAQYLGEYAPKMVEFGIV 342

  Fly   310 SWG-VGCARPQSPGVYTRVNQYLRWL 334
            |.| |.|.:...||:||.|.:|::|:
  Fly   343 SQGVVTCGQISLPGLYTNVGEYVQWI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9294NP_995920.1 Tryp_SPc 101..334 CDD:238113 90/274 (33%)
grassNP_651543.1 CLIP 32..90 CDD:197829
Tryp_SPc 121..371 CDD:238113 91/274 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.