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Protein Alignment CG9294 and Tmprss9

DIOPT Version :10

Sequence 1:	NP_995920.1	Gene:	CG9294 / 37491	FlyBaseID:	FBgn0034666	Length:	352	Species:	Drosophila melanogaster
Sequence 2:	NP_001382445.1	Gene:	Tmprss9 / 314636	RGDID:	1309581	Length:	1095	Species:	Rattus norvegicus

Alignment Length:	344	Identity:	120/344 - (34%)
Similarity:	173/344 - (50%)	Gaps:	28/344 - (8%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 WILIALFCGLCS----GSTERRIRPNEGKIFEWLGSILLPSTTTTTSTPVVATTSTTTRRTTTTS 65
            |||.|:.....|    .::..|:.|::.......|  |:|..:|.....:.||...|||...||.
  Rat   766 WILKAMSSDPSSTAHPHTSSTRLIPSQPPTTTAAG--LIPEASTGRPATLRATIRVTTRPLNTTL 828

  Fly    66 STTSRTTTSRTTVANFPIERDCVTCRCGLINTLYKIVGGQETRVHQYPWMAVILIYNRFY-CSGS 129
            |..|.||..:|......:......|.......|.:||||....:.::||...:.:..|.: |...
  Rat   829 SARSTTTRRQTPAPGTTVFSHLPDCGLAPPGALTRIVGGSAASLGEWPWQVSLWLRRREHRCGAV 893

  Fly   130 LINDLYVLTAAHC--VEGVPPE---LITLRFLEHNRSHSNDDIVIQRYVSRVKVHELYNPRSFDN 189
            |:.:.::|:||||  |.|.|.:   .:...||      |:.:..::| |:|:..|..||..:.|.
  Rat   894 LVAERWLLSAAHCFDVYGDPMQWAAFLGTPFL------SSTEGQLER-VARIYRHPFYNIYTLDY 951

  Fly   190 DLAVLRLNQPLDMRHHRL-RPICLPVQSYSFDHELGIVAGWGAQREGGFGTDTLREVDVVVLPQS 253
            |:|:|.|..|  :|..|| ||||||..:...:....::.|||:.||||.....|::..|.||.:.
  Rat   952 DVALLELAGP--VRRSRLVRPICLPGPTRPPEGARCVITGWGSLREGGSMARQLQKAAVRVLSEQ 1014

  Fly   254 ECRNGTTYRPGQITDNMMCAGYISEGGKDACSGDSGGPLQTTFDEQPGQYQLAGIVSWGVGCARP 318
            .||.   :.|.||:..|:|||: .:||.|:||||:||||...  |..||:.|.|:.|||.||.||
  Rat  1015 TCRR---FYPVQISSRMLCAGF-PQGGVDSCSGDAGGPLACR--EPSGQWVLTGVTSWGYGCGRP 1073

  Fly   319 QSPGVYTRVNQYLRWLGSN 337
            ..|||||||...|.|:|.|
  Rat  1074 HFPGVYTRVAAVLGWIGQN 1092

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.