DRSC/TRiP Functional Genomics Resources

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Protein Alignment tpr and Hgfac

DIOPT Version :10

Sequence 1:NP_611611.1 Gene:tpr / 37486 FlyBaseID:FBgn0034661 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_445772.1 Gene:Hgfac / 58947 RGDID:70909 Length:653 Species:Rattus norvegicus


Alignment Length:377 Identity:107/377 - (28%)
Similarity:177/377 - (46%) Gaps:66/377 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LICLALSCGPSQSASQDRATNQTAASPLLKQSQNTFIQ--------WVLSLLPQRPGSSDSENAT 65
            |.|||.:   |....|:...:...|:.||....:.:.:        |...:   :..:...|...
  Rat   302 LSCLAWN---SDLLYQELHVDSVGAAALLGLGPHAYCRNPDKDERPWCYVV---KDSALSWEYCR 360

  Fly    66 LATLSS----SSMMPDAASTTSTTTPAPSSSTTTTRRATTPAPPTLNPPRNCSDCVCGIAN---- 122
            ||...|    .|.:|:..:|      .|.|::|        |.||           ||..:    
  Rat   361 LAACESLARVHSRIPEVLAT------LPESTST--------ARPT-----------CGKRHKKRT 400

  Fly   123 -IQKRIVGGQETEVHQYPWVAMLLYGGRFYCAASLLNDQFLLTASHCVYGF-RKERISVRLLEH- 184
             ::.||:||..:....:||:| .:|.|..:||.||::..::::|:||.... .::.|:|.|.:| 
  Rat   401 FLRPRIIGGSSSLPGSHPWLA-AIYIGNGFCAGSLVHTCWVVSAAHCFSSSPPRDSITVVLGQHF 464

  Fly   185 -DRKMSHMQKIDRKVAEVITHPKYNARN-YDNDIAIIKLDEPVE----FNEVLHPVCMPTPGRSF 243
             :|.....|..  .:.:.:.:..|:..| .|:|:.:|:|.:..|    .::.:.|:|:|..|.||
  Rat   465 FNRTTDVTQTF--AIEKYVPYTLYSVFNPNDHDLVLIRLKKKGERCAVRSQFVQPICLPEAGSSF 527

  Fly   244 -KGENGIVTGWGAL--KVGGPTSDTLQEVQVPILSQDECRKSR-YGNKITDNMLCGGYDEGGKDS 304
             .|....:.|||.:  .|.| .|::|.|..||:::..:|.... ||..|:.||||.||.:...|:
  Rat   528 PTGHKCQIAGWGHMDENVSG-YSNSLLEALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDA 591

  Fly   305 CQGDSGGPLHIVASGTREHQIAGVVSWGEGCAKAGYPGVYARVNRYGTWIKN 356
            |||||||||....:|..  .:.|::|||:||.:...||||.||:.|..||.:
  Rat   592 CQGDSGGPLVCEKNGVA--YLYGIISWGDGCGRLNKPGVYTRVSNYVDWIND 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tprNP_611611.1 Tryp_SPc 127..356 CDD:238113 81/240 (34%)
HgfacNP_445772.1 FN2 99..145 CDD:128373
EGF_CA 159..194 CDD:238011
FN1 197..237 CDD:238018
EGF 242..274 CDD:394967
Kringle 283..364 CDD:395005 13/67 (19%)
Tryp_SPc 406..641 CDD:238113 81/240 (34%)
Blue background indicates that the domain is not in the aligned region.

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