DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tpr and proca

DIOPT Version :10

Sequence 1:NP_611611.1 Gene:tpr / 37486 FlyBaseID:FBgn0034661 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_956650.2 Gene:proca / 393327 ZFINID:ZDB-GENE-060824-5 Length:434 Species:Danio rerio


Alignment Length:268 Identity:90/268 - (33%)
Similarity:145/268 - (54%) Gaps:27/268 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 PRNCSDCVCGIANIQKR-------------IVGGQETEVHQYPWVAMLL-YGGRFYCAASLLNDQ 160
            |:|  |..||...|.|.             ::||...:..:.||.|::| :.|||:|...|:::.
Zfish   167 PKN--DASCGQIRIPKSAYANKPKPVLQPWVMGGNVGKRGESPWQALILNHLGRFHCGGVLIDEN 229

  Fly   161 FLLTASHCVYGFRKERISVRLLEHDRKMSHMQKIDRKVAEVITHPKYNARNYDNDIAIIKLDEPV 225
            ::|||:||:.  ...:.||||.::.|......::...|.:.|:||:||....|||||:::|:.||
Zfish   230 WVLTAAHCLE--TSSKFSVRLGDYQRFRFEGSEVTLPVKQHISHPQYNPITVDNDIALLRLEGPV 292

  Fly   226 EFNEVLHPVCMPT--PGRSFKGENG---IVTGWGALKVGGPT-SDTLQEVQVPILSQDECRKSRY 284
            :|:..:.|.|:|:  ..:.....||   ::||||.......: :.||..|::||:...||.:...
Zfish   293 KFSTYILPACLPSLELAKRMLHRNGTVTVITGWGKNNQSATSYNSTLHYVELPIVDNKECSRHMM 357

  Fly   285 GNKITDNMLCGGYDEGGKDSCQGDSGGPLHIVASGTREHQIAGVVSWGEGCAKAGYPGVYARVNR 349
             |.::|||||.|.....||:|:||||||:..:...|  ..:.|:|||||||.:....|:|.:|..
Zfish   358 -NNLSDNMLCAGVLGQVKDACEGDSGGPMMTLFHDT--WFLVGLVSWGEGCGQRDKLGIYTKVAS 419

  Fly   350 YGTWIKNL 357
            |..||.::
Zfish   420 YLDWIDSV 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tprNP_611611.1 Tryp_SPc 127..356 CDD:238113 83/235 (35%)
procaNP_956650.2 None

Return to query results.
Submit another query.