DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tpr and Ser8

DIOPT Version :10

Sequence 1:NP_611611.1 Gene:tpr / 37486 FlyBaseID:FBgn0034661 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_610874.1 Gene:Ser8 / 36489 FlyBaseID:FBgn0019928 Length:260 Species:Drosophila melanogaster


Alignment Length:250 Identity:81/250 - (32%)
Similarity:115/250 - (46%) Gaps:41/250 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 RIVGGQETEVHQYPWVAMLLYGGRFYCAASLLNDQFLLTASHCV------------YGFRKERIS 178
            |||||..:.:...||...|...|..:|..|::::..::||:||:            .|..|....
  Fly    34 RIVGGTASSIEDRPWQVSLQRSGSHFCGGSIISNNIIVTAAHCLDTPTTVSNLRIRAGSNKRTYG 98

  Fly   179 VRLLEHDRKMSHMQKIDRKVAEVITHPKYNARNYDNDIAIIKLDEPVEFNEVLHPVCM--PTPGR 241
            ..|:|              ||.:..|..||:.:..|||.:::|...:.|...:..:.|  .||..
  Fly    99 GVLVE--------------VAAIKAHEAYNSNSKINDIGVVRLKTKLTFGSTIKAITMASATPAH 149

  Fly   242 SFKGENGIVTGWGALKVGGPTSDTLQEVQVPILSQDECRKSR--YGNKITDNMLCGGYDEGGKDS 304
               |....::|||.....||:|.||..|...|:.:.:|..|.  ||:.|...|:|..  ...||:
  Fly   150 ---GSAASISGWGKTSTDGPSSATLLFVDTRIVGRSQCGSSTYGYGSFIKATMICAA--ATNKDA 209

  Fly   305 CQGDSGGPLHIVASGTREHQIAGVVSWGEGCAKAGYPGVYARVNRYGTWIKNLTK 359
            |||||||||  |:.|    |:.||||||..||.|.||||||.:.....|:....|
  Fly   210 CQGDSGGPL--VSGG----QLVGVVSWGRDCAVANYPGVYANIAELRDWVLQAQK 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tprNP_611611.1 Tryp_SPc 127..356 CDD:238113 79/244 (32%)
Ser8NP_610874.1 Tryp_SPc 35..253 CDD:238113 78/242 (32%)

Return to query results.
Submit another query.