DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tpr and CG4259

DIOPT Version :10

Sequence 1:NP_611611.1 Gene:tpr / 37486 FlyBaseID:FBgn0034661 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_608645.1 Gene:CG4259 / 33385 FlyBaseID:FBgn0031389 Length:270 Species:Drosophila melanogaster


Alignment Length:206 Identity:64/206 - (31%)
Similarity:100/206 - (48%) Gaps:23/206 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 YPWVAMLL----YGGRFYCAASLLNDQFLLTASHCVYGFRKERISVRLLEHDRK-MSHMQKIDRK 197
            :|||..:|    :..|:....||:|...:|||:|.:.|..|..:.||..|.|.. .:..|.:|.:
  Fly    39 FPWVVSVLDQRDWLFRYIGVGSLINPNVVLTAAHILNGTTKYDLVVRAGEWDTSTTADQQHVDLE 103

  Fly   198 VAEVITHPKYNARNYDNDIAIIKLDEPVEF--NEVLHPVCMPTPGRSFKGENGIVTGWGALKVGG 260
            |..:::|.::|..|.:|::|::.|....|.  |..|.|:.:...|.. || :....|||.:.:..
  Fly   104 VLNIVSHEQFNRFNAENNMALLILVSAFEMTANINLIPLYLQEAGIQ-KG-SCFFNGWGKVYLNS 166

  Fly   261 ---PTSDTLQEVQVPILSQDECRKSRYGNKITDNMLCGGYDEGGKDSCQGDSGGPL--HIVASGT 320
               ||  .|:.|||.:||...| .||   |:....:||...||  ..|.||.|.||  .|:....
  Fly   167 TDYPT--VLKTVQVDLLSMGMC-SSR---KLPIQQICGKGLEG--IDCSGDGGAPLVCRILTYPY 223

  Fly   321 REHQIAGVVSW 331
            :..|: |:|:|
  Fly   224 KYAQV-GIVNW 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tprNP_611611.1 Tryp_SPc 127..356 CDD:238113 64/206 (31%)
CG4259NP_608645.1 Tryp_SPc 39..256 CDD:214473 64/206 (31%)

Return to query results.
Submit another query.