DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tpr and LOC3290013

DIOPT Version :10

Sequence 1:NP_611611.1 Gene:tpr / 37486 FlyBaseID:FBgn0034661 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_556287.4 Gene:LOC3290013 / 3290013 VectorBaseID:AGAMI1_001965 Length:313 Species:Anopheles gambiae


Alignment Length:244 Identity:77/244 - (31%)
Similarity:124/244 - (50%) Gaps:25/244 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 RIVGGQETEVHQYPW-VAML--LYGGRFYCAASLLNDQFLLTASHCVYGFRKERISVRL------ 181
            |||||......|.|: ||:|  |..|:..|...||::.|:|||..||     |..|..:      
Mosquito    69 RIVGGSIATAGQIPYQVAILSDLEAGQALCGGVLLSNNFVLTAGVCV-----ENTSGGVVVLGAL 128

  Fly   182 -LEHDRKMSHMQKIDRKVAEVITHPKYNARNYDNDIAIIKLDEPVEFNEVLHPVCMP--TPGRSF 243
             |:::.:...: :|.....:|..|.::.|..:.|:||.|:|.|||.|::.:.||.:|  ..||:|
Mosquito   129 NLQNEAEAGQV-RITFAAGDVRLHEEFLAVIFRNNIAAIRLSEPVSFSDRIQPVRIPAAADGRTF 192

  Fly   244 KGENGIVTGWGALKVGGPT-SDTLQEVQVPILSQDECRKSRYGNKITDNMLCGGYDEGGKDSCQG 307
            .|....|:|:|.......: ||.|:.|:.||::..:|..:.:|..|....:|..|.| .:..|.|
Mosquito   193 AGALATVSGFGRTSDSSTSFSDVLRYVRNPIMTNADCFATAWGGLIDGQKMCLHYME-ARAPCDG 256

  Fly   308 DSGGPLHIVASGTREHQIAGVVSWGE--GCAKAGYPGVYARVNRYGTWI 354
            |.|||:.:...|:.  .:.|:.|:|.  || ::.:|.|:.|:..|..||
Mosquito   257 DVGGPMTVADGGST--LLVGLYSFGSVLGC-ESDWPAVFVRITFYRQWI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tprNP_611611.1 Tryp_SPc 127..356 CDD:238113 76/243 (31%)
LOC3290013XP_556287.4 None

Return to query results.
Submit another query.