DRSC/TRiP Functional Genomics Resources

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Protein Alignment tpr and F12

DIOPT Version :10

Sequence 1:NP_611611.1 Gene:tpr / 37486 FlyBaseID:FBgn0034661 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001014028.1 Gene:F12 / 306761 RGDID:1359175 Length:603 Species:Rattus norvegicus


Alignment Length:360 Identity:112/360 - (31%)
Similarity:166/360 - (46%) Gaps:88/360 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TAASPLLKQSQN------TFIQWVLSLLPQRPGSSDSENATLATLSSSSMMPDAASTTSTTTPAP 89
            |..||:..:|.:      ..:|     :||.|..||:       |.:|:...:..|.|||.    
  Rat   298 TLTSPVSPESHDMLKPRPPILQ-----MPQFPSLSDA-------LDNSTRNQNVVSRTSTV---- 346

  Fly    90 SSSTTTTRRATTPAPPTLNPPRNCSDCVCG------IANIQKRIVGGQETEVHQYPWVAMLLYGG 148
                                       |||      :::: :|:|||.......:|::|.|.:|.
  Rat   347 ---------------------------VCGQRFRKRLSSL-RRVVGGLVALPGSHPYIAALYWGD 383

  Fly   149 RFYCAASLLNDQFLLTASHCVYGFRK----ERISVRLLEHDRKMSHMQKIDR----KVAEVITHP 205
            .| ||.||::..::|||:||:   :|    |.::| :|..||   |.|..:|    .|.....|.
  Rat   384 SF-CAGSLIDPCWVLTAAHCL---QKRPAPEELTV-VLGQDR---HNQSCERCQTLAVHSYRLHE 440

  Fly   206 KYNARNYDNDIAIIKL----DEPVEFNEVLHPVCMPT----PGRSFKGENGIVTGWGALKVGGPT 262
            .::::.|.:|:|:::|    :.....:..:.|||:|:    |..:...|   |.|||....|...
  Rat   441 GFSSKTYQHDLALLRLRGRKNSCAILSPHVQPVCLPSSAAPPSETVLCE---VAGWGHQFEGAEE 502

  Fly   263 SDT-LQEVQVPILSQDECRKSR-YGNKITDNMLCGGYDEGGKDSCQGDSGGPLHIVASGTREHQI 325
            ..| |||.|||.:|.|.|..|. :|:.|...|||.|:.|||.|:||||||||| :...|..|.|:
  Rat   503 YATFLQEAQVPFISLDRCSSSNVHGDAILPGMLCAGFLEGGADACQGDSGGPL-VCDEGVTERQL 566

  Fly   326 A--GVVSWGEGCAKAGYPGVYARVNRYGTWIKNLT 358
            .  ||:|||.||.....||||..|..|..||:..|
  Rat   567 TLRGVISWGSGCGDRNKPGVYTDVANYLDWIQEHT 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tprNP_611611.1 Tryp_SPc 127..356 CDD:238113 91/248 (37%)
F12NP_001014028.1 FN2 40..87 CDD:238019
EGF_CA 95..130 CDD:238011
FN1 132..170 CDD:238018
EGF 177..207 CDD:394967
Kringle 216..294 CDD:395005
Tryp_SPc 362..600 CDD:238113 91/249 (37%)
Blue background indicates that the domain is not in the aligned region.

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