DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tpr and Habp2

DIOPT Version :10

Sequence 1:NP_611611.1 Gene:tpr / 37486 FlyBaseID:FBgn0034661 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001001505.2 Gene:Habp2 / 292126 RGDID:1302979 Length:558 Species:Rattus norvegicus


Alignment Length:294 Identity:91/294 - (30%)
Similarity:147/294 - (50%) Gaps:42/294 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 PAPPTLNPPRNCSDCV--------CGIANIQ----KRIVGGQETEVHQYPWVAML---------L 145
            |.....||..:..:.|        ||...:.    |||.||.::...::||...|         :
  Rat   275 PESDAANPLGSLQEPVMELPGFDSCGKTEMTEHAVKRIYGGFKSTAGKHPWQVSLQTSLPLTTSM 339

  Fly   146 YGGRFYCAASLLNDQFLLTASHCVYGFRKERISVRLLEHDRKMSHMQKIDRKVAEVITHPKYNAR 210
            ..|.| |..||::..::|||:||. ....:.:.|.|.:.|.|.:...:...:|.:::.:.:||.|
  Rat   340 PQGHF-CGGSLIHPCWVLTAAHCT-DMSTKHLKVVLGDQDLKKTESHEQTFRVEKILKYSQYNER 402

  Fly   211 NY--DNDIAIIKLDEPVE-----FNEVLHPVCMPT-PGRSFKGENGIVTGWGALKVGGPTSDTLQ 267
            :.  .||||::|| :||.     .::.:..||:|: |..|  |....::|||..:. |..|..|.
  Rat   403 DEIPHNDIALLKL-KPVGGHCALESKYVKTVCLPSDPFPS--GTECHISGWGVTET-GEGSRQLL 463

  Fly   268 EVQVPILSQDECR-KSRYGNKITDNMLC-GGYDEGGKDSCQGDSGGPLHIVASGTREHQIAGVVS 330
            :.:|.:::...|. :..|.:.|.|:|:| |...:.|.|:|||||||||.....||  :.:.|:||
  Rat   464 DAKVKLIANALCNSRQLYDHTIDDSMICAGNLQKPGSDTCQGDSGGPLTCEKDGT--YYVYGIVS 526

  Fly   331 WGEGCAKAGYPGVYARVNRYGTWIK-NLTKQACL 363
            ||:.|.|.  ||||.:|.::..||| .:.|:|.|
  Rat   527 WGQECGKK--PGVYTQVTKFLNWIKTTMHKEAGL 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tprNP_611611.1 Tryp_SPc 127..356 CDD:238113 80/248 (32%)
Habp2NP_001001505.2 EGF_CA 71..107 CDD:238011
KR 191..275 CDD:238056 91/294 (31%)
Tryp_SPc 312..551 CDD:238113 80/248 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.